CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0295800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os05g0295800 AK070232.1 - Glyoxalase I (EC 4.4.1.5) 2e-10 At1g08110 lactoylglutathione lyase, putative / glyoxalase I, putative S.X. H.G.
0.73 91.1 Os01g0834400 AB095438.1 - HAP3 1e-17 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) S.X. H.G.
0.46 60.9 Os09g0511500 AK060504.1 - Zn-finger, RING domain containing protein 8e-1 At1g49940 - S.X. H.G.
0.46 60.9 Os02g0510100 AK058487.1 - The start codon is not identified. 6e-18 At2g43810 small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative S.X. H.G.
0.31 34.5 Os03g0219500 AK059646.1 - BolA-like protein family protein 2e-2 At4g26500 CPSUFE (CHLOROPLAST SULFUR E) S.X. H.G.
0.27 27.5 Os07g0659100 BI796809 - Ankyrin repeat containing protein 2e+0 At1g07880 ATMPK13 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.9 97.3 GSM195230 5d-seed GSE7951 Genome-wide gene expression profiling of rice stigma
6.6 97.3 GSM302917 endo6D_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
5.1 96.6 GSM159212 Seed (S2, 3 - 4 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
5.0 96.6 GSM302916 endo6D_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
5.0 96.6 GSM159211 Seed (S2, 3 - 4 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
4.6 96.3 GSM159210 Seed (S2, 3 - 4 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
4.3 96.1 GSM195229 Endosperm GSE7951 Genome-wide gene expression profiling of rice stigma
4.1 96.0 GSM240999 gif1 7 DAF, biological replicate 3 GSE9498 Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
4.1 96.0 GSM240998 gif1 7 DAF, biological replicate 2 GSE9498 Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
3.2 94.9 GSM240997 gif1 7 DAF, biological replicate 1 GSE9498 Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-2 42 Os10g0487400 AK064407.1 - The start codon is not identified. 2e-1 At3g23930 unknown protein C.G. S.X.
0.02 7e-2 40 Os01g0183400 NM_189585.1 - Transcription factor CBF/NF-Y/archaeal histonedomain containing protein 7e+0 At5g63240 glycosyl hydrolase family protein 17 C.G. S.X.
0.02 7e-2 40 Os04g0507400 9632.m04096 - - 3e+0 At3g03480 CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase) C.G. S.X.
0.01 7e-2 40 Os04g0132500 AK121779.1 - Protein kinase domain containing protein 5e-4 At3g24240 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.01 7e-2 40 Os10g0579800 AK121847.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 2e-2 At5g08150 unknown protein C.G. S.X.
0.01 3e-1 38 Os03g0364500 AK108428.1 - Hypothetical protein 6e-4 At2g26770 plectin-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 2e-10 67 Arabidopsis thaliana At1g08110 837330 lactoylglutathione lyase, putative / glyoxalase I, putative F:calmodulin binding, lactoylglutathione lyase activity;P:response to cadmium ion, carbohydrate metabolic process;C:chloroplast;BOFPMA - - - C.G. S.X.
0.12 4e-15 83 Glycine max Gma.4045.1.S1_at AJ010423.1 glyoxalase I - 2e-22 At1g08110 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.48 8e-165 579 Hordeum vulgare Contig565_at Contig565 - - 4e-14 At1g08110 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.30 4e-18 93 Populus trichocarpa Ptp.4491.1.S1_at CV276525 hypothetical protein - 4e-32 At1g08110 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.49 3e-160 565 Triticum aestivum Ta.23373.1.S1_x_at BF200755 - - 6e-19 At1g08110 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.09 1e-23 109 Vitis vinifera 1612332_at CF511577 - - 2e-21 At1g08110 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.43 2e-119 428 Zea mays Zm.16759.1.A1_at BM338376 lactoylglutathione lyase - 1e-11 At1g08110 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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