Gene omics information

Query gene ID Os05g0292600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7189.6Os05g0292600AK071967.1-Chloroplast 50S ribosomal protein L145e-68Atcg00780-S.X.H.G.
0.6787.2Os10g0356366CR288737--3e-30Atcg00510-S.X.H.G.
0.6079.7Os01g0789400NM_195997.1-Alpha subunit of RNA polymerase2e-50Atcg00740-S.X.H.G.
0.2931.1Os10g0527100BI795990-Chloroplast ATP synthase a chain precursor (EC3.6.3.14) (ATPase subunit IV)2e+0At5g15850COL1 (constans-like 1)S.X.H.G.
0.2321.2Os07g0567400AK068245.1--1e-4At5g45040cytochrome c6 (ATC6)S.X.H.G.
0.138.2Os02g0199300AK064726.1-Peptidylprolyl isomerase, FKBP-type domaincontaining protein2e-6At4g26555immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
24.899.5GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.999.3GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.999.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.798.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.898.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.798.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.798.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.698.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.598.7GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.398.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.250793Os09g03643009637.m01693--4e+0At5g06490zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.013e-240Os01g0848400AB071330.1-Homeobox domain containing protein9e-11At5g02030RPL (REPLUMLESS)C.G.S.X.
0.012e+034Os12g0614000AK068768.1-Conserved hypothetical protein7e-12At5g12230unknown proteinC.G.S.X.
0.016e+032Os09g05514009637.m03224--2e-5At4g23280protein kinase, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.205e-68260Arabidopsis thalianaAtcg00780--encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex---C.G.S.X.
0.272e-65252Glycine maxGma.10842.1.S1_s_atCA851794--5e-107Atcg00790-C.G.S.X.
0.520821Hordeum vulgareContig11738_atContig11738--5e-63Atcg00780-C.G.S.X.
0.271e-57226Populus trichocarpaPtpAffx.198.1.S1_atCV242920hypothetical protein-3e-115Atcg00750-C.G.S.X.
0.650708Triticum aestivumTaAffx.128896.1.S1_s_atCD891469--2e-49Atcg00780-C.G.S.X.
0.126e-133474Vitis vinifera1622010_atCF207538similar to RNA polymerase alpha subunit-0Atcg00740-C.G.S.X.
0.250753Zea maysZmAffx.1519.1.S1_s_at11990232-56--3e-25Atcg00770-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage