CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0281400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 58.1 Os05g0281400 AK073309.1 - GTP-binding protein SAR2 5e-1 At5g66580 unknown protein S.X. H.G.
0.59 78.0 Os05g0487600 AK059850.1 - Conserved hypothetical protein 7e-16 Atmg00690 - S.X. H.G.
0.50 68.0 Os01g0293200 AU030398 - Plant specific of unknown function DUF860 familyprotein 1e-2 At3g63090 ubiquitin thiolesterase S.X. H.G.
0.47 62.3 Os09g0500600 AK066999.1 - DNA topoisomerase III beta-1 (EC 5.99.1.2). Spliceisoform 2 1e-19 At2g32000 DNA topoisomerase family protein S.X. H.G.
0.38 46.9 Os09g0110200 9637.m00069 - Protein prenyltransferase domain containingprotein 8e-2 At1g29710 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.33 38.8 Os05g0387900 AK062285.1 - Conserved hypothetical protein 7e-3 At2g41760 unknown protein S.X. H.G.
0.27 27.5 Os03g0725300 AK063969.1 - Metallophosphoesterase domain containing protein 2e-7 At4g31770 calcineurin-like phosphoesterase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
28.0 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.7 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0 99.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.6 99.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.3 99.1 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 5e-60 232 Os09g0346700 AK070620.1 - Protein of unknown function DUF810 family protein 1e-7 At2g25800 - C.G. S.X.
0.11 3e-47 190 Os01g0254000 AK111904.1 - NTGB2 (Fragment) 1e-26 At3g62560 GTP-binding protein, putative C.G. S.X.
0.10 1e-30 135 Os01g0338000 AK112012.1 - GTP-binding protein SAR1A 1e-45 At3g62560 GTP-binding protein, putative C.G. S.X.
0.09 3e-13 77 Os06g0225000 AY620416.1 - GTP-binding protein SAR1B 1e-4 At3g62560 GTP-binding protein, putative C.G. S.X.
0.03 9e-3 42 Os05g0229000 CB665752 - D111/G-patch domain containing protein 9e-1 At3g09380 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 36 Arabidopsis thaliana At5g66580 836790 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P - - - C.G. S.X.
0.03 2e-1 38 Glycine max GmaAffx.71325.1.S1_at AW596401 - - 2e-7 At2g41940 ZFP8 (ZINC FINGER PROTEIN 8) C.G. S.X.
0.10 1e-33 143 Hordeum vulgare Contig3728_at Contig3728 - - 9e-28 At3g62560 GTP-binding protein, putative C.G. S.X.
0.03 2e-1 38 Populus trichocarpa Ptp.5570.1.S1_at CV261857 hypothetical protein - 5e-47 At3g62560 GTP-binding protein, putative C.G. S.X.
0.14 3e-33 143 Triticum aestivum Ta.8677.3.S1_a_at CA606818 - - 3e-13 At3g62560 GTP-binding protein, putative C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1606835_at CF518331 hypothetical protein LOC100255512 - 1e+0 At4g38680 GRP2 (GLYCINE RICH PROTEIN 2) C.G. S.X.
0.10 3e-34 145 Zea mays Zm.14470.2.A1_at BQ487244 GTP-binding protein SAR1A - 7e-22 At1g09180 ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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