CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0279600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os05g0279600 AK070566.1 - Conserved hypothetical protein 3e-9 At4g30900 - S.X. H.G.
0.71 89.6 Os05g0323100 AK109472.1 - Rhodanese-like domain containing protein 7e-26 At2g40760 rhodanese-like domain-containing protein S.X. H.G.
0.38 46.9 Os05g0105300 AK069395.1 - CAP-Gly domain containing protein 5e-2 At1g71440 PFI (PFIFFERLING) S.X. H.G.
0.35 41.7 Os06g0704900 AK103054.1 - Cell division-like protein 2e-50 At5g01230 FtsJ-like methyltransferase family protein S.X. H.G.
0.33 38.8 Os06g0105500 AK099594.1 - SAM (and some other nucleotide) binding motifdomain containing protein 1e-9 At4g16570 PRMT7 (PROTEIN ARGININE METHYLTRANSFERASE 7) S.X. H.G.
0.27 27.5 Os08g0338900 AK073476.1 - Conserved hypothetical protein 8e-8 At1g79020 transcription factor-related S.X. H.G.
0.23 21.2 Os02g0776800 AB042415.1 - Replication protein A 70kDa 3e-17 At2g06510 RPA1A (REPLICATION PROTEIN A 1A) S.X. H.G.
0.19 15.1 Os04g0507900 AK099220.1 - WD40-like domain containing protein 3e+0 At3g17780 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.5 99.6 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.4 98.1 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.8 97.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.5 97.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.4 97.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.0 97.6 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.3 97.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.4 97.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.3 97.2 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.9 97.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Os05g0528500 9633.m04232 - - 2e-2 At2g46130 WRKY43 C.G. S.X.
0.01 9e-2 40 Os08g0514000 9636.m04074 - Legume lectin, beta domain containing protein 3e-1 At4g02420 lectin protein kinase, putative C.G. S.X.
0.01 3e-1 38 Os01g0514600 AK119316.1 - Calponin-like actin-binding domain containingprotein 2e-15 At5g48460 fimbrin-like protein, putative C.G. S.X.
0.01 3e-1 38 Os02g0280700 AK065581.1 - Isopenicillin N synthase family protein 9e-1 At5g54000 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.01 3e-1 38 Os03g0752000 AK121199.1 - Conserved hypothetical protein 2e+0 At5g48670 AGL80 (AGAMOUS-LIKE 80) C.G. S.X.
0.01 3e-1 38 Os04g0492600 AK072226.1 - GCN2 homologue 3e-1 At5g44570 unknown protein C.G. S.X.
0.01 1e+0 36 Os05g0134800 9633.m00371 - Haem peroxidase, plant/fungal/bacterial familyprotein 1e-2 At3g01190 peroxidase 27 (PER27) (P27) (PRXR7) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 3e-9 63 Arabidopsis thaliana At4g30900 829214 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;BOFPAM - - - C.G. S.X.
0.17 4e-12 73 Glycine max GmaAffx.8318.1.S1_at CA819327 - - 7e-65 At4g30900 - C.G. S.X.
0.02 5e+0 32 Hordeum vulgare HD08E04r_at HD08E04r - - 1e+0 At2g42360 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.16 2e-5 52 Populus trichocarpa Ptp.7569.1.S1_at CV280902 hypothetical protein - 2e-89 At4g30900 - C.G. S.X.
0.48 0 704 Triticum aestivum Ta.29833.1.S1_at CD492204 - - 9e-12 At4g30900 - C.G. S.X.
0.02 5e-2 38 Vitis vinifera 1622538_at CF210831 hypothetical protein LOC100263811 - 1e+0 At2g07110 - C.G. S.X.
0.51 0 787 Zea mays Zm.18791.1.A1_at CF628695 - - 2e-23 At4g30900 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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