CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0276100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.95 99.6 Os05g0276100 AK069092.1 - Na+/H+ exchangeing protein-like 2e-5 At4g23700 ATCHX17 (CATION/H+ EXCHANGER 17) S.X. H.G.
0.56 76.3 Os01g0766800 NM_191384.1 - - 8e+0 At5g43410 ethylene-responsive factor, putative S.X. H.G.
0.55 73.7 Os04g0178500 9632.m00867 - - 5e+0 At5g28780 unknown protein S.X. H.G.
0.53 71.3 Os12g0117500 AK109861.1 - Hypothetical protein 7e-2 At4g28320 glycosyl hydrolase family 5 protein / cellulase family protein S.X. H.G.
0.53 71.3 Os06g0361200 9634.m02532 - - 2e+0 At5g41910 RNA polymerase II mediator complex protein-related S.X. H.G.
0.52 69.6 Os05g0203200 9633.m00998 - - 5e+0 At3g11210 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.51 68.7 Os01g0371400 NM_193841.1 - Glutathione S-transferase, C-terminal domaincontaining protein 5e-3 At3g62760 ATGSTF13 S.X. H.G.
0.46 60.9 Os03g0799400 9631.m05754 - - 1e-1 At5g44860 unknown protein S.X. H.G.
0.44 58.1 Os11g0176700 9639.m00693 - - 5e-1 At4g14819 unknown protein S.X. H.G.
0.44 58.1 Os07g0497950 9635.m03086 - - 2e+0 At2g16860 GCIP-interacting family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
228.0 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
48.2 99.9 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
44.1 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.4 98.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.3 98.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.2 98.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.8 97.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.3 97.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1 97.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.6 97.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 2e-29 133 Os05g0113300 AK106443.1 - Conserved hypothetical protein 4e-4 At3g53720 ATCHX20 (CATION/H+ EXCHANGER 20) C.G. S.X.
0.15 4e-36 155 Os05g0485000 AK106318.1 - Conserved hypothetical protein 2e+0 At1g03600 photosystem II family protein C.G. S.X.
0.14 9e-22 107 Os01g0817400 NM_191084.1 - Conserved hypothetical protein 6e+0 At5g37060 ATCHX24 C.G. S.X.
0.05 8e-13 77 Os05g0382200 9633.m02899 - Na+/H+ exchangeing protein-like 2e-1 At4g23700 ATCHX17 (CATION/H+ EXCHANGER 17) C.G. S.X.
0.04 5e-8 61 Os05g0473400 AK100933.1 - Hypothetical protein 2e-3 At1g67840 CSK (CHLOROPLAST SENSOR KINASE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-5 52 Arabidopsis thaliana At4g23700 828470 ATCHX17 (CATION/H+ EXCHANGER 17) member of Putative Na+/H+ antiporter family - - - C.G. S.X.
0.01 3e-2 42 Glycine max PsAffx.C12000069_at PsAffx.C12000069 - - 2e-2 At1g67670 unknown protein C.G. S.X.
0.04 2e-7 57 Hordeum vulgare HM08H20r_at HM08H20r - - 7e-2 At2g33830 dormancy/auxin associated family protein C.G. S.X.
0.06 5e-10 67 Populus trichocarpa PtpAffx.208448.1.S1_at pmrna16781 cation proton exchanger - 1e-12 At3g17630 ATCHX19 (CATION/H+ EXCHANGER 19) C.G. S.X.
0.01 4e-1 38 Triticum aestivum TaAffx.37923.1.S1_at BJ258547 - - 4e-3 At3g63170 chalcone isomerase C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1619874_at CB004955 - - 7e-3 At2g16580 auxin-responsive protein, putative C.G. S.X.
0.02 2e-3 44 Zea mays Zm.990.1.A1_at CF636054 - - 1e+1 At5g44345 F-box family protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006885 Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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