CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0273201

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 73.7 Os05g0273201 9633.m01723 - - 4e+0 At2g46150 - S.X. H.G.
0.67 87.2 Os06g0365200 AK069849.1 - Conserved hypothetical protein 4e-1 At5g06790 unknown protein S.X. H.G.
0.50 68.0 Os01g0274000 9635.m01900 - - 1e-1 At1g01350 nucleic acid binding / protein binding / zinc ion binding S.X. H.G.
0.50 68.0 Os02g0487200 9630.m02721 - - 3e-1 At4g33740 unknown protein S.X. H.G.
0.47 62.3 Os05g0283600 AK106958.1 - The start codon is not identified. 6e+0 At5g49015 Expressed protein S.X. H.G.
0.39 48.3 Os03g0643100 AK106587.1 - Conserved hypothetical protein 7e-1 At5g54940 eukaryotic translation initiation factor SUI1, putative S.X. H.G.
0.31 34.5 Os01g0502600 9629.m02960 - - 2e+0 At2g34070 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
39.2 99.9 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.1 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.6 99.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.2 99.6 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.4 99.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.2 99.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.1 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.7 99.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.4 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.1 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 1e-9 63 Os12g0593600 9640.m03930 - - 8e-1 At3g25727 unknown protein C.G. S.X.
0.24 1e-20 99 Os04g0656900 9632.m05474 - - 1e+0 At5g25990 unknown protein C.G. S.X.
0.23 4e-17 87 Os01g0808800 NM_191019.1 - - 2e+0 At4g15733 SCRL11 (SCR-Like 11) C.G. S.X.
0.06 7e-22 103 Os07g0115700 NM_194144.1 - Endonuclease/exonuclease/phosphatase familyprotein 7e-2 At1g50300 TAF15 (TBP-associated factor 15) C.G. S.X.
0.03 1e-9 63 Os12g0102600 AK072365.1 - TPR-like domain containing protein 2e-2 At1g30475 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e+0 30 Arabidopsis thaliana At2g46150 819222 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF - - - C.G. S.X.
0.05 6e+0 30 Glycine max GmaAffx.88373.1.S1_at CA801991 - - 2e-5 At3g09960 calcineurin-like phosphoesterase family protein C.G. S.X.
0.04 2e+0 30 Hordeum vulgare HU12O16u_at HU12O16u - - 3e-1 At3g55920 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative C.G. S.X.
0.02 4e-1 34 Populus trichocarpa PtpAffx.210733.1.S1_at pmrna21058 hypothetical protein - 8e-13 At5g23870 pectinacetylesterase family protein C.G. S.X.
0.05 2e+1 28 Triticum aestivum TaAffx.29505.1.S1_at CA641417 - - 1e+1 At5g03500 transcription coactivator C.G. S.X.
0.04 5e+0 28 Vitis vinifera 1615655_at CB346154 - - 1e+0 At5g39610 ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6) C.G. S.X.
0.05 3e+1 26 Zea mays ZmAffx.950.1.A1_at AI833420 hypothetical protein LOC100277168 - 3e+0 At5g08410 FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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