CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0269000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.35 41.7 Os05g0269000 CB666416 - Hypothetical protein 3e-2 At4g39890 AtRABH1c (Arabidopsis Rab GTPase homolog H1c) S.X. H.G.
0.63 82.7 Os09g0371400 9637.m01753 - - 2e-4 At5g10190 transporter-related S.X. H.G.
0.61 81.2 Os08g0515100 NM_188989.1 - Sulfotransferase family protein 2e-3 At3g45080 sulfotransferase family protein S.X. H.G.
0.61 81.2 Os12g0448100 9640.m02506 - - 1e+0 At4g16240 unknown protein S.X. H.G.
0.53 71.3 Os04g0422700 AK111485.1 - Conserved hypothetical protein 5e-1 At2g11005 glycine-rich protein S.X. H.G.
0.50 68.0 Os10g0404600 9638.m02259 - - 4e+0 At5g28410 unknown protein S.X. H.G.
0.50 68.0 Os05g0225100 AK109834.1 - Conserved hypothetical protein 2e-1 At1g02065 SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8) S.X. H.G.
0.20 16.5 Os02g0734700 9630.m04916 - Conserved hypothetical protein 1e+0 At1g17520 DNA-binding protein, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
177.7 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
62.8 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
16.6 98.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.0 98.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.4 98.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.0 97.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.9 97.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.8 97.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 5e-98 359 Os10g0357700 AK106693.1 - Conserved hypothetical protein 9e-1 At4g39890 AtRABH1c (Arabidopsis Rab GTPase homolog H1c) C.G. S.X.
0.11 3e-17 89 Os07g0496000 AK111986.1 - Nt-rab6 protein 9e-68 At2g44610 RAB6A C.G. S.X.
0.09 1e-33 145 Os10g0149700 AK064371.1 - - 4e-2 At1g18170 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein C.G. S.X.
0.07 4e-43 176 Os04g0487000 AK111312.1 - Conserved hypothetical protein 9e-2 At1g18170 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein C.G. S.X.
0.04 2e-8 61 Os11g0240700 AK100421.1 - Hypothetical protein 3e-1 At2g01780 S-locus glycoprotein, putative C.G. S.X.
0.02 2e-8 61 Os03g0337200 AK065446.1 - Hypothetical protein 1e-1 At1g28540 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-2 40 Arabidopsis thaliana At4g39890 830148 AtRABH1c (Arabidopsis Rab GTPase homolog H1c) F:protein binding, GTP binding;P:protein transport, small GTPase mediated signal transduction;C:endomembrane system;MOFPBVA - - - C.G. S.X.
0.03 7e-1 36 Glycine max GmaAffx.31809.1.S1_at BI970273 - - 3e-19 At4g17610 tRNA/rRNA methyltransferase (SpoU) family protein C.G. S.X.
0.02 4e+0 32 Hordeum vulgare Contig18795_at Contig18795 - - 3e+0 At2g39900 LIM domain-containing protein C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.215423.1.S1_at pmrna29592 hypothetical protein - 2e+0 At5g40500 unknown protein C.G. S.X.
0.02 5e-1 36 Triticum aestivum TaAffx.108968.1.S1_at CA681747 - - 4e+0 At5g08480 VQ motif-containing protein C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1618947_at CF568981 - - 3e+0 At5g06710 HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA) C.G. S.X.
0.02 3e+0 32 Zea mays Zm.7641.1.A1_at BM351144 - - 2e+0 At1g01350 nucleic acid binding / protein binding / zinc ion binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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