CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0255200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 79.7 Os05g0255200 9633.m01478 - - 7e+0 At4g09260 unknown protein S.X. H.G.
0.60 79.7 Os01g0260300 9629.m01542 - - 1e-1 At5g05230 ubiquitin-protein ligase S.X. H.G.
0.60 79.7 Os11g0308700 9639.m01908 - - 6e-1 At4g33350 chloroplast inner membrane import protein Tic22, putative S.X. H.G.
0.46 60.9 Os10g0331500 AK060146.1 - Conserved hypothetical protein 2e+0 At2g29740 UGT71C2 (UDP-GLUCOSYL TRANSFERASE 71C2) S.X. H.G.
0.44 58.1 Os04g0348200 9632.m02648 - - 2e+0 At5g35300 unknown protein S.X. H.G.
0.43 55.4 Os11g0239000 9639.m01244 - - 1e+1 At1g80610 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
65.1 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
34.2 99.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.9 99.4 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.6 99.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.2 99.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 1e-12 75 Os02g0255900 9630.m01468 - Conserved hypothetical protein 2e+0 At3g22450 structural constituent of ribosome C.G. S.X.
0.11 9e-38 159 Os04g0550200 AK108473.1 - Pathogenesis-related transcriptional factor andERF domain containing protein 2e-6 At2g35700 ERF38 (ERF FAMILY PROTEIN 38) C.G. S.X.
0.10 2e-20 101 Os11g0591400 AK062944.1 - Hypothetical protein 4e+0 At3g20865 AGP40 (arabinogalactan-protein 40) C.G. S.X.
0.08 7e-14 79 Os08g0485650 9636.m03810 - - 6e-1 At5g22300 NIT4 (NITRILASE 4) C.G. S.X.
0.07 4e-18 93 Os03g0683600 9631.m04664 - - 2e-1 At1g75550 glycine-rich protein C.G. S.X.
0.06 4e-18 93 Os12g0635700 AK108161.1 - Conserved hypothetical protein 9e-3 At4g36830 GNS1/SUR4 membrane family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e+0 32 Arabidopsis thaliana At4g09260 826509 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.03 2e-1 38 Glycine max GmaAffx.6736.2.S1_at BE210199 - - 5e-7 At5g39570 unknown protein C.G. S.X.
0.03 9e-1 34 Hordeum vulgare Contig20485_at Contig20485 - - 3e-1 At4g25470 CBF2 (C-REPEAT/DRE BINDING FACTOR 2) C.G. S.X.
0.02 3e+0 34 Populus trichocarpa Ptp.3717.2.S1_at BU886642 - - 1e-7 Atcg00510 - C.G. S.X.
0.08 8e-9 61 Triticum aestivum TaAffx.79715.1.S1_at CA710016 - - 4e+0 At2g35700 ERF38 (ERF FAMILY PROTEIN 38) C.G. S.X.
0.02 8e+0 30 Vitis vinifera 1622162_at CD718954 - - 1e+0 At3g02390 unknown protein C.G. S.X.
0.03 5e-2 38 Zea mays Zm.11683.1.A1_at BM379917 - - 4e+0 At3g45673 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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