Gene omics information

Query gene ID Os05g0241400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5573.7Os05g0241400AK107803.1-Profilin/allergen family protein4e-1At4g19400actin bindingS.X.H.G.
0.5676.3Os01g0265900NM_188007.1-Translin family protein5e-7At2g03780translin family proteinS.X.H.G.
0.5068.0Os05g0277200AK110612.1-Conserved hypothetical protein3e+0At5g05670signal recognition particle bindingS.X.H.G.
0.3948.3Os11g0146500AK122002.1-SPla/RYanodine receptor SPRY domain containingprotein3e+0At5g14370-S.X.H.G.
0.3846.9Os04g0485400AK120649.1-Nucleotide-binding protein7e-47At5g50960NBP35 (NUCLEOTIDE BINDING PROTEIN 35)S.X.H.G.
0.3338.8Os07g0158200AK103532.1-TatD-related deoxyribonuclease family protein4e-8At3g52390tatD-related deoxyribonuclease family proteinS.X.H.G.
0.3236.3Os10g0141900AK106467.1-Queuine/other tRNA-ribosyltransferase familyprotein5e-2At1g15110phosphatidyl serine synthase family proteinS.X.H.G.
0.2625.6Os03g0343700AK102274.1-Brix domain containing protein5e-2At5g61770PPAN (PETER PAN-LIKE PROTEIN)S.X.H.G.
0.2524.1Os03g0654500AK066127.1--3e-4At1g28760unknown proteinS.X.H.G.
0.2321.2Os04g0438700AK060634.1-Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein3e+0At1g09030NF-YB4 (NUCLEAR FACTOR Y, SUBUNIT B4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.298.7GSM4094349311_young panicle 2cm, biological rep5GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
13.798.5GSM4094329311_young panicle 2cm, biological rep3GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
12.298.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.798.2GSM4094319311_young panicle 2cm, biological rep2GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
11.298.2GSM4094309311_young panicle 2cm, biological rep1GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
10.898.1GSM4094339311_young panicle 2cm, biological rep4GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
9.297.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.797.8GSM409422Nipponbare_young panicle 2cm, biological rep2GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
8.397.7GSM409421Nipponbare_young panicle 2cm, biological rep1GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
8.197.7GSM409429Nipponbare_young panicle 2cm, biological rep5GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-240Os03g07841009631.m05600-Patatin family protein3e-3At4g29800PLP8 (PATATIN-LIKE PROTEIN 8)C.G.S.X.
0.025e-240Os05g0467300AK061873.1-Conserved hypothetical protein7e-7At3g47300SELT (SELT-LIKE PROTEIN PRECURSOR)C.G.S.X.
0.025e-240Os08g0318400AK103062.1-Conserved hypothetical protein6e-1At5g11930glutaredoxin family proteinC.G.S.X.
0.015e-240Os05g0113000AK059086.1-Amino acid-binding ACT domain containing protein1e-2At2g20875EPF1 (EPIDERMAL PATTERNING FACTOR 1)C.G.S.X.
0.015e-240Os06g0287500AK072967.1-Disease resistance protein family protein4e-2At1g62240unknown proteinC.G.S.X.
0.015e-240Os11g0578700AK102056.1-Hypothetical protein9e-1At5g23950C2 domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.084e-136Arabidopsis thalianaAt4g19400827681actin bindingF:actin binding;P:cytoskeleton organization;C:actin cytoskeleton;PO---C.G.S.X.
0.032e+034Glycine maxPsAffx.psZS010xH14f_s_atPsAffx.psZS010xH14f--8e-1At3g02000ROXY1C.G.S.X.
0.524e-98357Hordeum vulgareContig13393_atContig13393--3e-5At4g19400actin bindingC.G.S.X.
0.043e-550Populus trichocarpaPtpAffx.69262.1.A1_atCV262399hypothetical protein-7e-3At4g19400actin bindingC.G.S.X.
0.436e-31135Triticum aestivumTaAffx.121272.2.S1_atBQ608303--4e+0At2g23060GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.031e-136Vitis vinifera1611435_s_atCB340587hypothetical protein LOC100258683-4e+0At3g28850glutaredoxin family proteinC.G.S.X.
0.402e-31135Zea maysZm.17701.1.S1_atCK370965hypothetical protein LOC100278172-4e-1At4g19400actin bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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