Gene omics information

Query gene ID Os05g0219800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.8Os05g0219800AK102822.1-DEAH helicase isoform 61e-4At1g79890helicase-relatedS.X.H.G.
0.4051.1Os03g0106300AB158462.1-Coiled-coil protein1e-2At5g01490CAX4 (CATION EXCHANGER 4)S.X.H.G.
0.3338.8Os01g0332500AK101382.1-Peptidase S10, serine carboxypeptidase familyprotein4e-6At3g17180scpl33 (serine carboxypeptidase-like 33)S.X.H.G.
0.3134.5Os06g0159400AK101286.1-U box domain containing protein2e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)S.X.H.G.
0.105.7Os10g0488900AK069090.1--2e-2At4g02750pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.094.9Os09g03820809637.m01846--5e-4At5g49840ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
40.299.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.699.8GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.199.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.299.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.199.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.299.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.799.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.699.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.999.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.899.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.013e-346Os04g05015009632.m04037-K+ channel tetramerisation domain containingprotein3e-6At2g24240potassium channel tetramerisation domain-containing proteinC.G.S.X.
0.013e-346Os12g0613600AK111002.1-Remorin, C-terminal region domain containingprotein5e-2At1g30320remorin family proteinC.G.S.X.
0.011e-244Os08g01903009636.m00866-Disease resistance protein family protein3e-2At3g24860hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.015e-242Os01g0218800AK120836.1-Trithorax 5 (Fragment)2e-18At4g27910SDG16 (SET DOMAIN PROTEIN 16)C.G.S.X.
0.015e-242Os04g0463000AK120857.1-Protein kinase domain containing protein3e-1At1g48480RKL1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-450Arabidopsis thalianaAt1g79890844328helicase-relatedF:in 6 functions;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:unknown;MOFPABV---C.G.S.X.
0.011e-140Glycine maxGmaAffx.65756.1.S1_atBF598384--2e-3At5g64430octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinC.G.S.X.
0.251e-55218Hordeum vulgareContig23437_atContig23437--2e+0At5g66870ASL1C.G.S.X.
0.074e-1791Populus trichocarpaPtpAffx.200616.1.S1_atpmrna1205hypothetical protein-2e-55At1g79890helicase-relatedC.G.S.X.
0.078e-1893Triticum aestivumTaAffx.30607.1.S1_atCA623679--1e+1Atmg00120-C.G.S.X.
0.012e+034Vitis vinifera1618518_atCB342656hypothetical protein LOC100249603-2e+0At5g17130cysteine-type peptidaseC.G.S.X.
0.012e-138Zea maysZm.1926.1.A1_atCO521075hypothetical protein LOC100192826-8e-9At1g24440protein binding / zinc ion bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006139The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
LGO:0006289A DNA repair process in which a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts).
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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