CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0210600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 91.1 Os05g0210600 AK104996.2 - TPR-like domain containing protein 4e+0 At4g14365 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein S.X. H.G.
0.44 58.1 Os01g0281600 AK062646.1 - Plastocyanin-like domain containing protein 6e-4 At1g08500 plastocyanin-like domain-containing protein S.X. H.G.
0.40 51.1 Os11g0592600 AK068548.1 - Targeting for Xklp2 family protein 1e-2 At5g03890 unknown protein S.X. H.G.
0.38 46.9 Os03g0294800 AK066380.1 - Protein kinase domain containing protein 4e-3 At2g40270 protein kinase family protein S.X. H.G.
0.31 34.5 Os08g0547500 AK065731.1 - Kinesin-like polypeptides 4 (Fragment) 5e-10 At3g51150 kinesin motor family protein S.X. H.G.
0.21 17.9 Os03g0852400 AK109338.2 - Conserved hypothetical protein 1e-1 At3g30220 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.3 98.2 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
9.4 97.9 GSM302919 leaf_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
7.4 97.5 GSM304485 Control for the unstable lines (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
7.1 97.4 GSM302918 leaf_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
6.7 97.3 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
6.5 97.2 GSM304646 Unstable transgenic line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
6.4 97.2 GSM304497 Unstable transgenic line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
5.9 97.0 GSM387562 Wild-type, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
5.5 96.8 GSM304478 Control for the unstable lines GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
5.4 96.8 GSM281585 Rice Zhonghua11, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.38 1e-75 286 Os01g0218200 NM_188476.1 - Protein prenyltransferase domain containingprotein 5e-3 At3g58620 TTL4 (Tetratricopetide-repeat Thioredoxin-Like 4) C.G. S.X.
0.09 2e-12 75 Os01g0616300 NM_192795.1 - TPR-like domain containing protein 1e+0 At3g14950 TTL2 (Tetratricopetide-repeat Thioredoxin-Like 2) C.G. S.X.
0.08 1e-17 93 Os05g0587300 AK120811.1 - Protein prenyltransferase domain containingprotein 4e-1 At1g53300 TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1) C.G. S.X.
0.01 1e-1 40 Os12g0174100 AK110878.1 - Hypothetical plant protein family protein 3e-13 At1g35510 unknown protein C.G. S.X.
0.01 5e-1 38 Os01g0902900 9629.m06725 - - 8e-1 At1g49390 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e+0 34 Arabidopsis thaliana At4g14365 827080 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA - - - C.G. S.X.
0.03 4e-1 38 Glycine max Gma.6991.1.S1_at BI968839 - - 6e-7 At1g53300 TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1) C.G. S.X.
0.11 1e-23 111 Hordeum vulgare Contig18901_at Contig18901 - - 1e+0 Atmg00990 - C.G. S.X.
0.02 1e-3 46 Populus trichocarpa PtpAffx.216528.1.S1_at pmrna31362 hypothetical protein - 4e-32 At1g53300 TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1) C.G. S.X.
0.05 8e-14 79 Triticum aestivum TaAffx.17425.1.A1_at CK205680 - - 5e+0 At5g36290 unknown protein C.G. S.X.
0.03 5e-6 52 Vitis vinifera 1615966_at CF215207 hypothetical protein LOC100247135 - 2e-4 At3g58620 TTL4 (Tetratricopetide-repeat Thioredoxin-Like 4) C.G. S.X.
0.11 8e-18 91 Zea mays Zm.6019.1.A1_at AI666235 hypothetical protein LOC100191407 - 9e-2 At3g13350 high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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