Gene omics information

Query gene ID Os05g0207900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7088.4Os05g0207900AK068570.1-Peptidase C48, SUMO/Sentrin/Ubl1 family protein4e-10At1g09730Ulp1 protease family proteinS.X.H.G.
0.8496.0Os07g0623100AK108461.1-ER66 protein (Fragment)3e-6At5g09410EICBP.B (ETHYLENE INDUCED CALMODULIN BINDING PROTEIN)S.X.H.G.
0.7189.6Os04g0550400AK067475.1-Conserved hypothetical protein4e-1At2g44950HUB1 (HISTONE MONO-UBIQUITINATION 1)S.X.H.G.
0.5676.3Os05g0126300CB635555-Conserved hypothetical protein1e-2At3g57740protein kinase family proteinS.X.H.G.
0.4762.3Os05g0144300AK068173.1-Type III restriction enzyme, res subunit familyprotein2e-28At3g06010ATCHR12S.X.H.G.
0.4660.9Os02g0114000CB675710-SNF2-related domain containing protein1e+0At4g21800QQT2 (quatre-quart2)S.X.H.G.
0.4458.1Os11g0303500AK068734.1-Hypothetical protein3e-1At5g01900WRKY62S.X.H.G.
0.4458.1Os12g0102400AK103750.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein6e-16At3g45630RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.4355.4Os04g0440100AK105415.1-Nonsense-mediated decay UPF3 domain containingprotein2e-9At1g33980Smg-4/UPF3 family proteinS.X.H.G.
0.4253.9Os07g0495900AK060293.1-Regulator of nonsense transcripts 1 homolog1e-6At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.796.4GSM302923seedling_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
4.696.3GSM195223Ovary 3, biological rep 3GSE7951Genome-wide gene expression profiling of rice stigma
4.596.3GSM159183Y Leaf, biological rep 1GSE6893Expression data for reproductive development in rice
4.596.3GSM159185Y Leaf, biological rep 3GSE6893Expression data for reproductive development in rice
4.496.2GSM35713314-day-old seedling, rep 2GSE14275Expression data for heat shock in rice seedlings
4.396.1GSM195221Ovary 1, biological rep 1GSE7951Genome-wide gene expression profiling of rice stigma
4.296.0GSM159190Young inflorescence (P1, upto 3 cm), biological rep 2GSE6893Expression data for reproductive development in rice
4.296.0GSM302922seedling_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
4.196.0GSM173091Rice OsSRT1 RNAi transgenic line LM1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
4.196.0GSM159189Young inflorescence (P1, upto 3 cm), biological rep 1GSE6893Expression data for reproductive development in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-140Os03g0370600CA766241-Clt12e-2At3g05890RCI2B (RARE-COLD-INDUCIBLE 2B)C.G.S.X.
0.017e-138Os03g0340900AB042935.1-RSH16e-31At4g02260RSH1 (RELA-SPOT HOMOLOG 1)C.G.S.X.
0.017e-138Os06g0473200AK119330.1-NPK22e-5At5g40440ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)C.G.S.X.
0.017e-138Os11g01404009640.m00336-Calcium-translocating P-type ATPase, PMCA-typefamily protein2e-24At3g57330ACA11 (autoinhibited Ca2+-ATPase 11)C.G.S.X.
0.013e+036Os02g0273800AK071312.1-TPR-like domain containing protein2e-5At2g32230pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.013e+036Os04g0482000AK064801.1-Peptide methionine sulfoxide reductase (EC1.8.4.6) (Protein- methionine-S-oxide reductase) (PeptideMet(O) reductase)6e-1At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)C.G.S.X.
0.013e+036Os12g0541500AK067367.1-Elongation factor Ts (EF-Ts)1e-10At4g29060emb2726 (embryo defective 2726)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-1067Arabidopsis thalianaAt1g09730837501Ulp1 protease family proteinF:cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;MOFPBVA---C.G.S.X.
0.078e-344Glycine maxGma.7221.1.S1_atBQ628598--1e-8At1g09730Ulp1 protease family proteinC.G.S.X.
0.013e+034Hordeum vulgareContig8830_atContig8830--1e-1At2g27390proline-rich family proteinC.G.S.X.
0.069e-1273Populus trichocarpaPtpAffx.201963.1.S1_atpmrna3917hypothetical protein-5e-44At1g09730Ulp1 protease family proteinC.G.S.X.
0.016e+034Triticum aestivumTaAffx.128800.1.S1_atBG313254--1e-10At1g65260PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4)C.G.S.X.
0.014e-136Vitis vinifera1608213_atCF209965hypothetical protein LOC100245233-9e-2At2g26290ARSK1 (root-specific kinase 1)C.G.S.X.
0.013e+034Zea maysZm.15352.1.A1_x_atCF627435hypothetical protein LOC100279011-2e-1At3g09590pathogenesis-related protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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