CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0206000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os05g0206000 AK107740.1 - Hypothetical protein 3e-1 At2g04520 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative S.X. H.G.
0.67 87.2 Os01g0284900 AK106618.1 - Conserved hypothetical protein 8e-1 At2g37000 TCP family transcription factor, putative S.X. H.G.
0.60 79.7 Os06g0147000 AK120978.1 - Conserved hypothetical protein 3e-1 At4g28830 methyltransferase/ nucleic acid binding S.X. H.G.
0.50 68.0 Os02g0191600 9630.m00899 - Basic-leucine zipper (bZIP) transcription factordomain containing protein 1e-1 At2g04038 AtbZIP48 (Arabidopsis thaliana basic leucine-zipper 48) S.X. H.G.
0.47 62.3 Os02g0824500 AK111296.1 - - 2e-3 At3g48940 remorin family protein S.X. H.G.
0.44 58.1 Os03g0386000 AK072984.1 - WD domain protein-like 3e-5 At1g78070 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
101.8 100.0 GSM278855 KT95-418-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
50.3 99.9 GSM278849 WuYun3-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
45.3 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
29.2 99.7 GSM159262 Drought stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
23.0 99.3 GSM159264 Drought stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
22.7 99.3 GSM159263 Drought stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
14.9 98.6 GSM159266 Salt stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
12.8 98.4 GSM159265 Salt stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
10.7 98.1 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
9.9 98.0 GSM278846 WuYun3-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-1 38 Os08g0274700 AK120575.1 - Partner of SLD five, PSF3 family protein 3e+0 At5g52840 NADH-ubiquinone oxidoreductase-related C.G. S.X.
0.03 5e-1 36 Os04g0684300 AK105205.1 - Hypothetical protein 2e+1 Atcg00560 - C.G. S.X.
0.02 1e-1 38 Os05g0590100 AK072823.1 - Ubiquitin domain containing protein 8e-5 At2g46500 phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein C.G. S.X.
0.02 1e-1 38 Os08g0220400 AK106909.1 - Pectinesterase family protein 2e-1 At3g11820 SYP121 (SYNTAXIN OF PLANTS 121) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-1 36 Arabidopsis thaliana At2g04520 814994 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative F:RNA binding, translation initiation factor activity;P:translational initiation;C:cellular_component unknown;OMAFP - - - C.G. S.X.
0.04 4e-1 36 Glycine max GmaAffx.12474.1.S1_at BE346566 MYB transcription factor MYB171 - 3e-9 At5g62470 MYB96 (myb domain protein 96) C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig4456_s_at Contig4456 - - 2e-1 At1g68870 unknown protein C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.25123.1.A1_at CV231764 hypothetical protein - 2e-2 At3g29000 calcium-binding EF hand family protein C.G. S.X.
0.04 3e-1 36 Triticum aestivum Ta.24423.1.S1_s_at CA638337 Beta-expansin EXPB6 - 3e+0 At1g21950 unknown protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1612996_at CD798919 - - 5e-2 At4g11600 ATGPX6 (GLUTATHIONE PEROXIDASE 6) C.G. S.X.
0.03 5e-1 34 Zea mays Zm.19041.1.A1_at BU037207 hypothetical protein LOC100272438 - 2e-2 At1g02840 SR1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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