CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0201700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 78.0 Os05g0201700 9633.m00984 - - 6e+0 At1g78200 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.42 53.9 Os04g0305700 AK068128.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-1 At2g43010 PIF4 (phytochrome interacting factor 4) S.X. H.G.
0.41 52.4 Os09g0373200 AK109686.1 - Strictosidine synthase family protein 2e-1 At5g20540 ATBRXL4 (BREVIS RADIX-LIKE 4) S.X. H.G.
0.40 51.1 Os06g0289900 CR280016 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 8e-1 At2g37950 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.39 48.3 Os02g0646500 AF148877.1 - Aldehyde dehydrogenase domain containing protein 4e+0 At5g01830 armadillo/beta-catenin repeat family protein / U-box domain-containing protein S.X. H.G.
0.33 38.8 Os07g0489300 AK060228.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 3e+0 At2g15320 leucine-rich repeat family protein S.X. H.G.
0.30 32.7 Os01g0106300 AK119550.1 - Isoflavone reductase homolog IRL (EC 1.3.1.-) 6e-1 At2g34200 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.29 31.1 Os02g0589400 9630.m03609 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-2 At5g47080 CKB1 S.X. H.G.
0.25 24.1 Os04g0623200 AK105231.1 - Conserved hypothetical protein 4e-1 At4g29230 anac075 (Arabidopsis NAC domain containing protein 75) S.X. H.G.
0.21 17.9 Os10g0539700 AK120628.1 - Conserved hypothetical protein 1e+0 At2g11890 adenylate cyclase S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.0 98.8 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
14.2 98.5 GSM421725 MOCK, 96 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.5 98.2 GSM421724 MOCK, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.3 98.2 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.6 98.1 GSM421684 XOC, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.5 97.9 GSM421669 XOC, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.4 97.9 GSM421677 XOC, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.3 97.9 GSM421667 XOC, 2 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.2 97.9 GSM421708 MOCK, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.1 97.7 GSM421713 MOCK, 4 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 4e-24 113 Os01g0198900 AK069974.1 - Conserved hypothetical protein 1e-1 At2g35960 NHL12 C.G. S.X.
0.04 8e-4 46 Os05g0202300 AK109150.1 - Conserved hypothetical protein 1e-1 At5g14180 MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1) C.G. S.X.
0.04 8e-4 46 Os06g0173800 9634.m00707 - - 1e-1 At4g33660 unknown protein C.G. S.X.
0.04 8e-4 46 Os11g0617400 9639.m03684 - - 5e-2 At5g07560 GRP20 (GLYCINE-RICH PROTEIN 20) C.G. S.X.
0.03 2e-4 48 Os03g0237200 9631.m01271 - Zn-finger, C2H2 type domain containing protein 2e-7 At1g68130 AtIDD14 (Arabidopsis thaliana Indeterminate(ID)-Domain 14) C.G. S.X.
0.03 8e-4 46 Os09g0548600 9637.m03196 - - 2e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e+0 32 Arabidopsis thaliana At1g78200 844156 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:plasma membrane;PMOBFVA - - - C.G. S.X.
0.03 4e-2 40 Glycine max HgAffx.6164.1.S1_at CB826077 - - 1e+0 At4g17500 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1) C.G. S.X.
0.23 7e-29 127 Hordeum vulgare Contig17412_at Contig17412 - - 2e+1 At4g28460 unknown protein C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.213839.1.S1_at pmrna27003 - - 2e-22 At1g04880 high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein C.G. S.X.
0.04 7e-3 42 Triticum aestivum Ta.11769.3.S1_x_at CA727407 - - 3e-1 At3g13227 serine-rich protein-related C.G. S.X.
0.03 1e-1 36 Vitis vinifera 1611454_s_at CF607081 - - 6e-45 At1g60060 unknown protein C.G. S.X.
0.03 4e-2 38 Zea mays Zm.2147.1.A1_s_at BM380613 glycine-rich cell wall structural protein - 4e-1 At4g01995 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage