CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0184666

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os05g0184666 9633.m00828 - - 2e+0 At5g38220 hydrolase S.X. H.G.
0.67 87.2 Os01g0207700 NM_188356.1 - Protein of unknown function DUF6 domain containingprotein 1e-1 At5g28630 glycine-rich protein S.X. H.G.
0.60 79.7 Os05g0138400 9633.m00402 - - 5e-1 At4g08640 ATP binding / protein binding S.X. H.G.
0.55 73.7 Os01g0528600 9629.m03233 - - 3e+0 At1g58150 unknown protein S.X. H.G.
0.40 51.1 Os11g0202900 9639.m00919 - - 2e+1 At4g24080 ALL1 (Aldolase like) S.X. H.G.
0.34 40.0 Os10g0465300 9638.m02855 - - 3e-1 At5g22650 HD2B (HISTONE DEACETYLASE 2B) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
65.4 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
43.1 99.9 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.8 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.6 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.3 99.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.8 99.6 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
26.1 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.8 99.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.63 0 716 Os05g0183900 9633.m00822 - - 3e+0 At2g28500 LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11) C.G. S.X.
0.14 2e-35 151 Os05g0593000 AK064253.1 - Conserved hypothetical protein 8e-4 At4g29780 unknown protein C.G. S.X.
0.11 7e-23 109 Os01g0186900 AK120573.1 - Hypothetical protein 4e-1 At3g04310 unknown protein C.G. S.X.
0.10 3e-31 137 Os01g0582600 9629.m03821 - Conserved hypothetical protein 7e-5 At4g29780 unknown protein C.G. S.X.
0.09 3e-31 137 Os06g0526800 AK120510.1 - Protein phosphatase 2C family protein 7e-2 At5g24940 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.07 4e-15 83 Os11g0296900 9639.m01780 - - 2e-3 At5g13710 SMT1 (STEROL METHYLTRANSFERASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+1 30 Arabidopsis thaliana At5g59570 836076 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POM - - - C.G. S.X.
0.04 2e+0 34 Glycine max PsAffx.psZG001xK10f_at PsAffx.psZG001xK10f - - 1e+1 At4g20390 integral membrane family protein C.G. S.X.
0.05 1e-2 40 Hordeum vulgare Contig7018_at Contig7018 - - 1e+0 At3g60760 unknown protein C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.217490.1.S1_at pmrna32775 hypothetical protein - 4e+0 At5g43010 RPT4A C.G. S.X.
0.29 1e-22 107 Triticum aestivum Ta.7143.3.S1_a_at CA730168 - - 4e+0 At1g11700 unknown protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1619139_at CB919812 hypothetical protein LOC100261695 - 5e-6 At1g04070 TOM22-I (TRANSLOCASE OF OUTER MEMBRANE 22-I) C.G. S.X.
0.13 2e-10 65 Zea mays Zm.11770.1.A1_at BM380607 hypothetical protein LOC100191551 - 9e-5 At5g12010 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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