CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0177500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os05g0177500 AU172534 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e+0 At1g78410 VQ motif-containing protein S.X. H.G.
0.60 79.7 Os02g0700400 AB074005.1 - Alternative oxidase AOX1 6e-4 At3g22370 AOX1A (ALTERNATIVE OXIDASE 1A) S.X. H.G.
0.42 53.9 Os03g0375200 9631.m02535 - - 5e-2 At1g60010 unknown protein S.X. H.G.
0.40 51.1 Os09g0460700 AK108359.1 - Esterase/lipase/thioesterase domain containingprotein 5e-1 At3g48700 ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13) S.X. H.G.
0.29 31.1 Os11g0644600 CB621139 - Hypothetical protein 4e-1 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) S.X. H.G.
0.29 31.1 Os02g0827400 9630.m05797 - Protein of unknown function DUF789 family protein 1e-1 At1g15030 - S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.1 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.9 99.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.2 99.7 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
28.3 99.6 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
24.1 99.4 GSM174886 F FR13 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
19.9 99.1 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
16.8 98.8 GSM174889 H FR13 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
12.1 98.3 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
11.0 98.2 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
8.6 97.8 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 4e-18 93 Os02g0330000 9630.m02160 - Conserved hypothetical protein 1e+0 At3g50580 unknown protein C.G. S.X.
0.13 1e-27 125 Os02g0207400 9630.m01045 - - 2e-1 At4g34135 UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2) C.G. S.X.
0.12 1e-30 135 Os10g0178500 AK066178.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 3e+0 At4g16750 DRE-binding transcription factor, putative C.G. S.X.
0.12 2e-25 117 Os02g0206100 AK066593.1 - The start codon is not identified. 4e+0 At3g60550 CYCP3 C.G. S.X.
0.05 1e-14 81 Os02g0207100 AK119766.1 - BCH1 1e+0 At2g11005 glycine-rich protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At1g78410 844177 VQ motif-containing protein F:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;P - - - C.G. S.X.
0.07 6e-10 65 Glycine max GmaAffx.59500.3.S1_at BG790368 - - 2e+0 At5g57181 unknown protein C.G. S.X.
0.08 5e-11 67 Hordeum vulgare HM05N21r_at HM05N21r - - 1e+0 At2g17120 LYM2 (LYSM DOMAIN GPI-ANCHORED PROTEIN 2 PRECURSOR) C.G. S.X.
0.03 8e+0 32 Populus trichocarpa PtpAffx.222490.1.S1_at pmrna39951 hypothetical protein - 8e-3 At1g15690 AVP1 C.G. S.X.
0.31 1e-53 210 Triticum aestivum TaAffx.93119.1.A1_at BJ230352 - - 2e-2 At1g50470 - C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1622051_at CB342056 similar to cyclase - 1e-9 At4g35220 cyclase family protein C.G. S.X.
0.09 3e-12 71 Zea mays Zm.13390.1.A1_at AF457982.1 - - 4e+0 At3g01328 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0008152 The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage