CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0176700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.39 48.3 Os05g0176700 AK071729.1 - Conserved hypothetical protein 6e-6 At5g23100 unknown protein S.X. H.G.
0.56 76.3 Os02g0790500 AK066691.1 - Glycosyl transferase, family 20 domain containingprotein 3e-11 At1g68020 ATTPS6 S.X. H.G.
0.36 44.0 Os10g0207400 AK120253.1 - Conserved hypothetical protein 4e-1 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) S.X. H.G.
0.32 36.3 Os05g0344200 BI812679 - Hypothetical protein 3e+0 At2g02350 SKIP3 (SKP1 INTERACTING PARTNER 3) S.X. H.G.
0.26 25.6 Os01g0314100 AK067157.1 - Catalytic domain of components of variousdehydrogenase complexes containing protein 3e-7 At3g06850 BCE2 S.X. H.G.
0.08 4.2 Os04g0543500 9632.m04421 - Homeodomain-like containing protein 2e+0 At2g44730 transcription factor S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.5 97.2 GSM431934 Shoot- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
6.3 97.2 GSM159263 Drought stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
5.8 97.0 GSM431933 Shoot- +Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
5.8 97.0 GSM159262 Drought stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
4.8 96.5 GSM159264 Drought stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
4.8 96.5 GSM302922 seedling_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
4.8 96.5 GSM431926 Root- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
4.6 96.3 GSM302923 seedling_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
4.5 96.3 GSM431925 Root- +Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
4.4 96.2 GSM375648 Taichung 65_shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 6e-23 109 Os01g0175100 AK071289.1 - Conserved hypothetical protein 2e-3 At5g35680 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative C.G. S.X.
0.03 2e-4 48 Os10g0553600 9638.m03681 - Exostosin-like family protein 4e-2 At5g17760 AAA-type ATPase family protein C.G. S.X.
0.02 2e-4 48 Os10g0115600 AK100686.1 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 2e-9 At3g50670 U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K) C.G. S.X.
0.01 8e-4 46 Os03g0435200 AK120095.1 - TPR-like domain containing protein 2e-3 At4g39952 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-6 52 Arabidopsis thaliana At5g23100 832374 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 8e-3 42 Glycine max HgAffx.12256.1.S1_at CB375726 - - 2e-1 At3g43520 unknown protein C.G. S.X.
0.19 9e-19 93 Hordeum vulgare Contig7446_at Contig7446 - - 3e-1 At4g24240 WRKY7 C.G. S.X.
0.04 1e-1 38 Populus trichocarpa PtpAffx.201307.1.S1_at pmrna2597 hypothetical protein - 1e+0 At5g23950 C2 domain-containing protein C.G. S.X.
0.20 2e-21 103 Triticum aestivum Ta.30055.1.S1_at CK202803 - - 1e+0 At5g39890 unknown protein C.G. S.X.
0.03 3e-2 38 Vitis vinifera 1617694_at CB972462 hypothetical protein LOC100260852 - 1e-28 At2g20570 GPRI1 (GBF'S PRO-RICH REGION-INTERACTING FACTOR 1) C.G. S.X.
0.21 2e-25 115 Zea mays Zm.10237.1.A1_at BM333587 hypothetical protein LOC100277700 - 2e-2 At3g15630 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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