Gene omics information

Query gene ID	Os05g0156500
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.2	Os05g0156500	AK062718.1	-	Apobec-1 binding protein 2	2e-10	At3g62600	ATERDJ3B	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.73	91.1	Os06g0150400	AK067407.1	-	Saposin B domain containing protein	2e-4	At4g29520	-	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.50	68.0	Os02g0115900	AF006825.1	-	Endosperm lumenal binding protein	0	At5g42020	BIP2	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.43	55.4	Os09g0451500	AK072941.1	-	Thioredoxin-related domain containing protein	1e-18	At1g04980	ATPDIL2-2 (PDI-LIKE 2-2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.20	16.5	Os06g0716700	AK063385.1	-	Endoplasmin homolog precursor (GRP94 homolog)	2e-67	At4g24190	SHD (SHEPHERD)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.07	3.7	Os03g0213100	AK073633.1	-	Protein transport protein Sec61 alpha subunit	8e-57	At1g29310	P-P-bond-hydrolysis-driven protein transmembrane transporter	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.2	97.7	GSM159214	Seed (S3, 5 - 10 dap), biological rep 2	GSE6893	Expression data for reproductive development in rice
7.4	97.5	GSM275410	Bala root tip_At the wax layer_rep3	GSE10857	Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
7.1	97.4	GSM159213	Seed (S3, 5 - 10 dap), biological rep 1	GSE6893	Expression data for reproductive development in rice
6.9	97.3	GSM275408	Bala root tip_At the wax layer_rep1	GSE10857	Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
6.8	97.3	GSM159208	Seed (S1, 0 - 2 dap), biological rep 2	GSE6893	Expression data for reproductive development in rice
6.0	97.0	GSM159184	Y Leaf, biological rep 2	GSE6893	Expression data for reproductive development in rice
5.4	96.8	GSM159215	Seed (S3, 5 - 10 dap), biological rep 3	GSE6893	Expression data for reproductive development in rice
5.3	96.7	GSM357137	14-day-old seedling, heat shock, rep 3	GSE14275	Expression data for heat shock in rice seedlings
4.9	96.5	GSM357136	14-day-old seedling, heat shock, rep 2	GSE14275	Expression data for heat shock in rice seedlings
4.7	96.4	GSM275414	Azucena root tip_Before the wax layer_rep1	GSE10857	Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-9	65	Os01g0512100	9629.m03073	-	Altered Response to Gravity (ARG1 protein (AlteredResponse to Gravity) 32591-35072)	2e-41	At1g68370	ARG1 (ALTERED RESPONSE TO GRAVITY 1)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.17	2e-10	67	Arabidopsis thaliana	At3g62600	825434	ATERDJ3B	J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.24	6e-21	103	Glycine max	Gma.2546.1.S1_at	CA783454	-	-	6e-35	At3g62600	ATERDJ3B	C.G.	S.X.	Please select
0.57	0	650	Hordeum vulgare	Contig7280_at	Contig7280	-	-	3e-12	At3g62600	ATERDJ3B	C.G.	S.X.	Please select
0.25	1e-31	139	Populus trichocarpa	PtpAffx.80014.1.S1_at	CV264509	hypothetical protein	-	1e-24	At3g62600	ATERDJ3B	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.51	1e-169	597	Triticum aestivum	Ta.8128.1.S1_x_at	BQ161382	-	-	4e-12	At3g62600	ATERDJ3B	C.G.	S.X.	Please select
0.24	5e-24	111	Vitis vinifera	1620520_s_at	BQ797142	hypothetical protein LOC100252105	-	2e-23	At3g62600	ATERDJ3B	C.G.	S.X.	Please select
0.56	3e-177	621	Zea mays	Zm.5074.1.A1_at	AI600716	-	-	5e-14	At3g62600	ATERDJ3B	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
L	GO:0006457	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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