CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0155800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.49 64.4 Os05g0155800 9633.m00559 - - 2e-1 At5g39760 AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23) S.X. H.G.
0.32 36.3 Os06g0264900 9634.m01544 - Endonuclease/exonuclease/phosphatase familyprotein 4e-1 At1g73875 endonuclease/exonuclease/phosphatase family protein S.X. H.G.
0.32 36.3 Os12g0541000 9640.m03442 - Lumazine-binding protein family protein 2e+0 At5g54530 unknown protein S.X. H.G.
0.25 24.1 Os08g0510800 AK072063.1 - Conserved hypothetical protein 3e+0 At4g17500 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1) S.X. H.G.
0.19 15.1 Os12g0290200 AK112053.1 - - 1e-14 At5g50210 QS (QUINOLINATE SYNTHASE) S.X. H.G.
0.12 7.2 Os01g0605200 NM_192680.1 - DNL zinc finger domain containing protein 1e-6 At1g68730 zinc finger (DNL type) family protein S.X. H.G.
0.11 6.5 Os03g0198900 AK063273.1 - Methyladenine glycosylase family protein 7e-8 At5g57970 methyladenine glycosylase family protein S.X. H.G.
0.10 5.7 Os01g0104600 AK100613.1 - Light-mediated development protein DET1(Deetiolated1) 7e-5 At4g10180 DET1 (DE-ETIOLATED 1) S.X. H.G.
0.07 3.7 Os04g0466100 AK064543.1 - Cell division protein FtsH-like protein 3e-7 At3g02450 cell division protein ftsH, putative S.X. H.G.
0.06 3.0 Os09g0383400 AK103385.1 - Helicase, C-terminal domain containing protein 9e-5 At1g59990 DEAD/DEAH box helicase, putative (RH22) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
30.0 99.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
24.3 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.9 99.3 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.2 99.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.1 99.0 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.9 98.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.4 98.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.5 98.5 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.4 98.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 4e-19 97 Os05g0315700 9633.m02259 - - 7e+0 At2g30340 LBD13 (LOB DOMAIN-CONTAINING PROTEIN 13) C.G. S.X.
0.23 4e-22 107 Os07g0550600 AK109553.1 - Transferase family protein 8e-1 At5g55570 unknown protein C.G. S.X.
0.10 4e-16 87 Os01g0362900 9629.m02535 - - 4e-2 At4g02440 EID1 (EMPFINDLICHER IM DUNKELROTEN LICHT 1) C.G. S.X.
0.10 4e-16 87 Os05g0289700 9633.m01954 - - 1e+1 At4g24320 ubiquitin thiolesterase C.G. S.X.
0.07 2e-8 61 Os06g0185200 AK109116.1 - Hypothetical protein 6e-1 At3g55460 SCL30 C.G. S.X.
0.03 2e-8 61 Os01g0615300 AK061211.1 - Transferase family protein 2e-1 At3g03480 CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 38 Arabidopsis thaliana At5g39760 833972 AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23) F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOFVB - - - C.G. S.X.
0.03 2e-2 42 Glycine max PsAffx.C3000147_s_at PsAffx.C3000147 - - 8e+0 At3g53020 STV1 (SHORT VALVE1) C.G. S.X.
0.04 1e-6 54 Hordeum vulgare Contig17006_at Contig17006 - - 2e+1 At5g61160 AACT1 (anthocyanin 5-aromatic acyltransferase 1) C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.207322.1.S1_at pmrna14517 hypothetical protein - 3e+0 At3g27010 AT-TCP20 C.G. S.X.
0.09 3e-3 44 Triticum aestivum TaAffx.115280.1.S1_at CA659397 - - 8e-3 At3g03480 CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase) C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1616908_at CB347140 - - 6e-2 At1g01680 U-box domain-containing protein C.G. S.X.
0.04 1e-3 44 Zea mays Zm.11850.1.S1_at CO519970 10-deacetylbaccatin III 10-O-acetyltransferase - 3e+0 At1g76110 high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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