CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0148900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os05g0148900 AK120912.1 - Glutathione-S-transferase 19E50 1e+0 At1g03860 ATPHB2 (PROHIBITIN 2) S.X. H.G.
0.80 94.6 Os08g0130000 9636.m00276 - Conserved hypothetical protein 1e-11 At2g04305 magnesium transporter CorA-like protein-related S.X. H.G.
0.77 93.1 Os04g0534200 AK109583.1 - Receptor kinase-like protein 8e-4 At5g41180 leucine-rich repeat protein kinase, putative S.X. H.G.
0.55 73.7 Os02g0448000 9630.m02338 - Protein of unknown function DUF296 domaincontaining protein 8e-6 At4g22810 DNA-binding protein-related S.X. H.G.
0.50 68.0 Os12g0640700 AK108649.1 - N/apple PAN domain containing protein 8e-1 At5g44500 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative S.X. H.G.
0.46 60.9 Os05g0339000 9633.m02481 - VHS domain containing protein 6e-2 At5g46030 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.3 98.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.0 98.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.6 98.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.6 98.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.5 98.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.3 98.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.3 98.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.2 98.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.8 98.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.6 98.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.59 0 1106 Os05g0149000 AK111047.1 - Pectinesterase inhibitor domain containing protein 1e+0 At2g16510 vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) C.G. S.X.
0.15 5e-11 69 Os01g0370200 9629.m02604 - Glutathione-S-transferase 19E50 3e-1 At1g68552 CPuORF53 (Conserved peptide upstream open reading frame 53) C.G. S.X.
0.14 3e-12 73 Os01g0353400 9629.m02432 - Glutathione S-transferase GST 8 (EC 2.5.1.18) 4e-1 At5g59000 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.13 8e-16 85 Os01g0371200 AK058900.1 - Glutathione S-transferase 1 (EC 2.5.1.18) (GSTclass-phi) 2e+0 At2g30860 ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9) C.G. S.X.
0.08 2e-13 77 Os08g0202500 AK108353.1 - Conserved hypothetical protein 5e+0 At5g28490 LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1) C.G. S.X.
0.01 2e-10 67 Os01g0504500 AK122047.1 - Multi antimicrobial extrusion protein MatE familyprotein 2e+0 At2g41760 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At1g03860 839228 ATPHB2 (PROHIBITIN 2) prohibitin 2 - - - C.G. S.X.
0.03 1e-1 38 Glycine max GmaAffx.13162.1.S1_at BG044834 - - 5e-5 At1g53230 TCP3 C.G. S.X.
0.24 3e-15 81 Hordeum vulgare Contig1597_s_at Contig1597 - - 2e+0 At2g16575 unknown protein C.G. S.X.
0.04 5e-1 36 Populus trichocarpa PtpAffx.2229.2.S1_at BU880390 hypothetical protein - 3e-10 At4g02520 ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2) C.G. S.X.
0.28 4e-16 85 Triticum aestivum TaAffx.64719.1.A1_at CK211127 - - 3e+1 At3g05180 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.04 4e-4 44 Vitis vinifera 1616933_at CB345010 hypothetical protein LOC100265903 - 1e-13 At1g02920 GSTF7 C.G. S.X.
0.19 2e-10 65 Zea mays Zm.17839.1.S1_at U12679.1 glutathione S-transferase2 - 1e-1 At4g02520 ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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