CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0147400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os05g0147400 AK062146.1 - T-complex protein 1, zeta subunit (TCP-1-zeta)(CCT-zeta) (CCT-zeta- 1) 6e-67 At5g16070 chaperonin, putative S.X. H.G.
0.73 91.1 Os06g0538000 AK069949.1 - Chaperonin Cpn60/TCP-1 family protein 5e-83 At5g26360 chaperonin, putative S.X. H.G.
0.67 87.2 Os07g0209000 AK058399.1 - Dolichyl-di-phosphooligosaccharide-proteinglycotransferase (Oligosaccharyltransferase)-like 1e-24 At5g66680 DGL1 S.X. H.G.
0.50 68.0 Os05g0301500 AK067027.1 - Ribophorin I (Fragment) 7e-5 At1g76400 ribophorin I family protein S.X. H.G.
0.46 60.9 Os04g0551800 AK121568.1 - T-complex protein 1, alpha subunit (TCP-1-alpha)(CCT-alpha) 4e-40 At3g20050 ATTCP-1 S.X. H.G.
0.43 55.4 Os06g0562600 AK067114.1 - T-complex protein 1, epsilon subunit(TCP-1-epsilon) (CCT-epsilon) (TCP-K36) 2e-88 At1g24510 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.0 97.0 GSM275408 Bala root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
5.9 97.0 GSM275410 Bala root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
5.3 96.7 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
5.2 96.7 GSM275409 Bala root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
5.0 96.6 GSM275416 Azucena root tip_Before the wax layer_Rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.7 96.4 GSM409430 9311_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
4.7 96.4 GSM275414 Azucena root tip_Before the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.6 96.3 GSM409431 9311_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
4.6 96.3 GSM159186 SAM, biological rep 1 GSE6893 Expression data for reproductive development in rice
4.4 96.2 GSM409433 9311_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e-1 40 Os02g0157700 BI805581 - GTP-binding protein LepA family protein 2e-18 At5g08650 GTP-binding protein LepA, putative C.G. S.X.
0.01 1e-1 40 Os11g0514400 9639.m02863 - BRASSINOSTEROID INSENSITIVE 1-associated receptorkinase 1 precursor (EC 2.7.1.37) (BRI1-associatedreceptor kinase 1) (Somatic embryogenesis receptor-likekinase 3) 7e-2 At5g21090 leucine-rich repeat protein, putative C.G. S.X.
0.01 2e+0 36 Os02g0673100 AK108963.1 - Protein of unknown function UPF0005 family protein 2e-3 At2g27240 unknown protein C.G. S.X.
0.01 2e+0 36 Os04g0567200 AK110383.1 - Protein of unknown function UPF0005 family protein 3e-4 At4g17970 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 6e-67 256 Arabidopsis thaliana At5g16070 831464 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:cellular_component unknown;BOMFPA - - - C.G. S.X.
0.21 9e-39 163 Glycine max GmaAffx.84803.1.S1_at BU761560 - - 2e-60 At5g16070 chaperonin, putative C.G. S.X.
0.67 0 1415 Hordeum vulgare Contig3922_at Contig3922 - - 2e-45 At5g16070 chaperonin, putative C.G. S.X.
0.47 2e-67 258 Populus trichocarpa PtpAffx.215448.1.S1_at pmrna29650 hypothetical protein - 0 At3g02530 chaperonin, putative C.G. S.X.
0.69 0 1350 Triticum aestivum Ta.6733.2.S1_x_at CD888689 - - 2e-35 At5g16070 chaperonin, putative C.G. S.X.
0.33 6e-24 111 Vitis vinifera 1615908_at CF214075 hypothetical protein LOC100249757 - 9e-88 At3g02530 chaperonin, putative C.G. S.X.
0.70 0 1709 Zea mays Zm.6782.1.A1_at CF061901 hypothetical protein LOC100193477 - 5e-92 At5g16070 chaperonin, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006457 The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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