Gene omics information

Query gene ID Os05g0138200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4051.1Os05g0138200AK110261.1-Chitinase (Class II) (EC 3.2.1.14)2e-3At3g54420ATEP3S.X.H.G.
0.8094.6Os02g0614300AK112070.1-ANT (Ovule development protein aintegumenta)5e-20At1g51190PLT2 (PLETHORA 2)S.X.H.G.
0.7793.1Os01g0936900AK073591.1-Peptidase aspartic family protein1e+1At5g64667IDL2 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 2)S.X.H.G.
0.4051.1Os02g0111800AK111191.1-Protein kinase domain containing protein7e-3At1g08590CLAVATA1 receptor kinase (CLV1)S.X.H.G.
0.3846.9Os06g0634000AK073652.1-Hypothetical protein2e+0At2g41050PQ-loop repeat family protein / transmembrane family proteinS.X.H.G.
0.3846.9Os03g0347700AK110492.1-NPH3 domain containing protein1e-9At2g47860phototropic-responsive NPH3 family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
47.399.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
27.099.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.899.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.199.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.099.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.599.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.599.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.599.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.498.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.298.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.396e-61236Os01g0287600AK063062.1-Chitinase (Class II) (EC 3.2.1.14)3e-2At3g54420ATEP3C.G.S.X.
0.182e-1791Os05g0399400L37289.1-Chitinase (EC 3.2.1.14)4e-2At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.173e-1687Os06g0726200AK061042.1-Endochitinase precursor (EC 3.2.1.14)2e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.132e-1791Os06g0726100Z29962.1-Endochitinase precursor (EC 3.2.1.14)1e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.114e-654Os10g0542900BM038035-Chitinase (EC 3.2.1.14) (Fragment)3e-5At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.063e-757Os05g0399700AB012855.1-Chitinase (EC 3.2.1.14)3e+0At5g25940early nodulin-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-344Arabidopsis thalianaAt3g54420824608ATEP3encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.---C.G.S.X.
0.051e-552Glycine maxGmaAffx.29692.2.S1_atAI437572--8e-1At1g24260SEP3 (SEPALLATA3)C.G.S.X.
0.182e-1169Hordeum vulgareContig3576_atContig3576--1e-8At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.057e-136Populus trichocarpaPtpAffx.59940.1.S1_s_atCX657241--1e-3At2g43580chitinase, putativeC.G.S.X.
0.216e-1065Triticum aestivumTa.5873.2.S1_atCD902597--5e-1At3g23830GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4)C.G.S.X.
0.043e-342Vitis vinifera1608262_atAF053341.1class I extracellular chitinase-2e+0At3g04180germin-like protein, putativeC.G.S.X.
0.162e-859Zea maysZm.847.1.S1_atL00973.1hypothetical protein LOC100274400-1e-1At1g02360chitinase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0051707A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.
LGO:0006032The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues.
LGO:0016998The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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