CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os05g0114500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os05g0114500 9633.m00159 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 2e-1 At5g18362 unknown protein S.X. H.G.
0.73 91.1 Os07g0654300 AK121908.1 - Conserved hypothetical protein 1e+1 At3g15640 cytochrome c oxidase family protein S.X. H.G.
0.50 68.0 Os09g0437900 AK107833.1 - Adrenodoxin 9e-24 At4g05450 adrenodoxin-like ferredoxin 2 S.X. H.G.
0.50 68.0 Os11g0423800 AK064691.1 - Mitochondrial basic amino acid carrier 4e-9 At2g33820 MBAC1 S.X. H.G.
0.36 44.0 Os11g0593700 AK106617.1 - Cyclin-like F-box domain containing protein 1e+0 At1g70000 DNA-binding family protein S.X. H.G.
0.35 41.7 Os11g0265000 AK103877.1 - Uridine kinase family protein 1e-55 At4g26510 ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
173.7 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.9 96.5 GSM195224 Suspension cell GSE7951 Genome-wide gene expression profiling of rice stigma
4.7 96.4 GSM275416 Azucena root tip_Before the wax layer_Rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
4.5 96.3 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.3 96.1 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
3.8 95.7 GSM275414 Azucena root tip_Before the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.7 95.6 GSM409422 Nipponbare_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
3.5 95.3 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
3.3 95.1 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
3.3 95.1 GSM409428 Nipponbare_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-3 46 Os11g0446000 9639.m02307 - Conserved hypothetical protein 1e-14 At3g15240 - C.G. S.X.
0.02 1e-1 40 Os01g0277900 9629.m01698 - Heat shock protein DnaJ, N-terminal domaincontaining protein 5e+0 At1g10800 unknown protein C.G. S.X.
0.02 1e-1 40 Os02g0483700 9630.m02683 - - 1e+0 At2g44330 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 3e-2 42 Os01g0713600 AK109920.1 - Transcriptional factor B3 family protein 3e-6 At3g26790 FUS3 (FUSCA 3) C.G. S.X.
0.01 3e-2 42 Os03g0295900 9631.m01820 - - 3e+0 At5g43410 ethylene-responsive factor, putative C.G. S.X.
0.01 3e-2 42 Os07g0476200 AB057651.1 - TPR-like domain containing protein 9e-12 At2g06210 ELF8 (EARLY FLOWERING 8) C.G. S.X.
0.01 5e-1 38 Os07g0437000 9635.m02448 - Flavin monoxygenase-like protein floozy 6e-1 At5g11320 YUC4 (YUCCA4) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 38 Arabidopsis thaliana At5g18362 6240877 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO - - - C.G. S.X.
0.02 1e+0 36 Glycine max GmaAffx.60439.2.S1_at AW757139 - - 4e-3 At4g18830 OFP5 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 5) C.G. S.X.
0.16 2e-19 97 Hordeum vulgare Contig13454_at Contig13454 - - 4e-1 Atmg01410 - C.G. S.X.
0.08 3e-4 48 Populus trichocarpa PtpAffx.141343.1.S1_at CK101398 hypothetical protein - 5e+0 At3g02480 ABA-responsive protein-related C.G. S.X.
0.17 1e-30 135 Triticum aestivum Ta.16984.1.A1_at CD452579 - - 1e-1 At2g18120 SRS4 (SHI-RELATED SEQUENCE 4) C.G. S.X.
0.01 7e-2 38 Vitis vinifera 1607620_at CA817570 hypothetical protein LOC100250331 - 3e-1 At4g18120 AML3 (ARABIDOPSIS MEI2-LIKE 3) C.G. S.X.
0.01 4e-1 36 Zea mays Zm.17882.1.S1_at AW090884 - - 4e+0 At5g55856 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0009168 The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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