CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0687300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os04g0687300 AK060617.1 - Heat shock protein DnaJ, N-terminal domaincontaining protein 7e-1 At3g08000 RNA-binding protein, putative S.X. H.G.
0.46 60.9 Os07g0627700 AK110696.1 - Sterol desaturase family protein 1e-1 At5g18920 unknown protein S.X. H.G.
0.36 44.0 Os03g0324800 AK071431.1 - Hypothetical protein 9e+0 At5g47170 unknown protein S.X. H.G.
0.33 38.8 Os05g0443700 AK071068.1 - contains InterPro domain(s): IPR010989 8e-1 At3g55080 SET domain-containing protein S.X. H.G.
0.29 31.1 Os06g0608600 AK061418.1 - Conserved hypothetical protein 9e-3 At5g56020 - S.X. H.G.
0.17 12.6 Os01g0242500 NM_188723.1 - D-tyrosyl-tRNA(Tyr) deacylase family protein 9e-16 At4g18460 D-Tyr-tRNA(Tyr) deacylase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.5 98.3 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.0 98.2 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
9.7 98.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.2 97.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.5 97.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.2 97.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.1 97.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.8 97.0 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.7 96.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.5 96.8 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-2 42 Os02g0285800 AK099035.1 - GTP-binding protein TypA family protein 4e-62 At5g13650 elongation factor family protein C.G. S.X.
0.01 9e-2 40 Os02g0204500 CB627779 - Agenet domain containing protein 1e+0 At5g28615 - C.G. S.X.
0.01 1e+0 36 Os03g0378000 AK099806.1 - Nucleoside phosphatase GDA1/CD39 family protein 2e-5 At2g02970 nucleoside phosphatase family protein / GDA1/CD39 family protein C.G. S.X.
0.01 1e+0 36 Os06g0667000 AK110075.1 - Protein kinase domain containing protein 2e+0 At5g05440 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Arabidopsis thaliana At3g08000 819991 RNA-binding protein, putative F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOBA - - - C.G. S.X.
0.02 1e+0 36 Glycine max Gma.16689.1.S1_at BU761189 - - 4e-3 At1g11780 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.28 3e-60 232 Hordeum vulgare Contig11635_at Contig11635 - - 2e-1 At1g02405 proline-rich family protein C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.218786.1.S1_at pmrna34515 hypothetical protein - 5e+0 At2g37435 cysteine-type endopeptidase inhibitor C.G. S.X.
0.25 6e-57 222 Triticum aestivum Ta.1838.2.S1_at BJ271634 - - 3e-1 At2g05520 GRP-3 (GLYCINE-RICH PROTEIN 3) C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1610868_s_at BQ798111 hypothetical protein LOC100244419 - 2e-8 At1g79550 PGK (PHOSPHOGLYCERATE KINASE) C.G. S.X.
0.02 3e-1 36 Zea mays Zm.17966.2.A1_a_at CK826966 hypothetical protein LOC100273767 - 6e+0 At2g37910 cation/hydrogen exchanger, putative (CHX21) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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