Gene omics information

Query gene ID Os04g0660600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5877.0Os04g0660600AK120899.1-ATP synthase subunit H family protein3e-10At5g55290ATP synthase subunit H family proteinS.X.H.G.
0.8496.0Os11g0169900U27098.1-Vacuolar ATP synthase 16 kDa proteolipid subunit(EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit)(Fragment)4e-63At1g75630AVA-P4S.X.H.G.
0.7893.4Os05g0593100AK061855.1-Vacuolar ATP synthase subunit C (EC 3.6.3.14)(V-ATPase C subunit) (Vacuolar proton pump C subunit)2e-10At1g12840DET3 (DE-ETIOLATED 3)S.X.H.G.
0.7189.6Os01g0610100AK059810.1-Vacuolar ATP synthase 21 kDa proteolipid subunit(EC 3.6.3.14) (23-kDa subunit of V-ATPase)4e-23At2g25610H+-transporting two-sector ATPase, C subunit family proteinS.X.H.G.
0.6382.7Os01g0587000AK067605.1-Vacuolar ATP synthase subunit d (EC 3.6.3.14)(V-ATPase d subunit) (Vacuolar proton pump d subunit)(V-ATPase 41 KDa accessory protein) (DVA41)2e-75At3g28710H+-transporting two-sector ATPase, putativeS.X.H.G.
0.6181.2Os12g0168900AK071641.1--4e-51At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)S.X.H.G.
0.6079.7Os06g0662000AK071775.1-Vacuolar ATP synthase catalytic subunit A (EC3.6.3.14) (V-ATPase A subunit) (Vacuolar proton pumpalpha subunit) (V-ATPase 69 kDa subunit)0At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)S.X.H.G.
0.5676.3Os11g0127700AK103742.1-Hypothetical protein2e-1At1g49480RTV1 (related to vernalization1 1)S.X.H.G.
0.5676.3Os02g0586400L35845.1-Small GTP binding protein Rab27e-87At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.296.7GSM359903FL478 root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
5.096.6GSM359908IR29 root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
4.996.5GSM359914IR63731 root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
4.296.0GSM431926Root- +Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
4.296.0GSM431925Root- +Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
4.296.0GSM359915IR63731 root, control, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
4.196.0GSM359920Pokkali root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
4.196.0GSM359919Pokkali root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
4.196.0GSM359913IR63731 root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
4.196.0GSM359902FL478 root, control, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-344Os01g0124200AB098712.1-Bowman Birk trypsin inhibitor2e+0At4g00310EDA8 (EMBRYO SAC DEVELOPMENT ARREST 8)C.G.S.X.
0.037e-238Os05g03071009633.m02152-Hypothetical protein4e-1At4g11660AT-HSFB2BC.G.S.X.
0.033e-136Os03g06095009631.m03974-Protein of unknown function DUF260 domaincontaining protein9e-6At5g67420LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)C.G.S.X.
0.021e-344Os03g0728200CA762474-Protein prenyltransferase domain containingprotein1e+0At5g36228nucleic acid binding / zinc ion bindingC.G.S.X.
0.027e-238Os03g0152300AK070875.1--2e-1At3g49960peroxidase, putativeC.G.S.X.
0.014e-240Os08g0536100AK102567.1-Conserved hypothetical protein1e-1At3g26890unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.163e-1065Arabidopsis thalianaAt5g55290835622ATP synthase subunit H family proteinF:hydrogen ion transmembrane transporter activity;P:ATP hydrolysis coupled proton transport;C:vacuole;MPOF---C.G.S.X.
0.104e-446Glycine maxGmaAffx.92523.1.S1_atCF808248--7e-8At4g26710ATP synthase subunit H family proteinC.G.S.X.
0.402e-37155Hordeum vulgareContig6470_atContig6470--1e-3At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.061e-448Populus trichocarpaPtpAffx.50507.1.A1_s_atCV247777--2e-18At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.365e-46184Triticum aestivumTa.5109.1.S1_a_atCA713571Plasma membrane H+-ATPase subunit H-5e-3At4g26710ATP synthase subunit H family proteinC.G.S.X.
0.114e-1063Vitis vinifera1612654_atCA809225hypothetical protein LOC100256926-3e-19At5g55290ATP synthase subunit H family proteinC.G.S.X.
0.304e-51200Zea maysZm.1052.1.A1_atBM334713--2e+0At5g53610glycosyl hydrolase family protein 17C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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