Gene omics information

Query gene ID Os04g0648800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9499.4Os04g0648800AK067751.1-Conserved hypothetical protein1e-6At2g15530zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4762.3Os01g0268800AK105874.1-Ubiquitin-associated domain containing protein2e-4At3g56740ubiquitin-associated (UBA)/TS-N domain-containing proteinS.X.H.G.
0.4355.4Os04g0398600AK073335.1--3e-32At5g61840GUT1S.X.H.G.
0.4152.4Os09g0558000AK111778.1-Protein phosphatase type-2C9e-10At2g25070protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.3846.9Os03g0120300AK066854.1-THH15e-14At1g14530THH1 (TOM THREE HOMOLOG 1)S.X.H.G.
0.3134.5Os08g0562200AK099629.1-No apical meristem (NAM) protein domain containingprotein2e-2At5g04410NAC2S.X.H.G.
0.3032.7Os05g0511400AK101120.1-Protein kinase GhCLK1 (Fragment)3e-41At4g14350protein kinase family proteinS.X.H.G.
0.2931.1Os10g0545000AK069472.1--2e-1At5g64560magnesium transporter CorA-like family protein (MRS2-2)S.X.H.G.
0.2931.1Os06g0715400AK073963.1-Conserved hypothetical protein1e-2At5g66250kinectin-relatedS.X.H.G.
0.2931.1Os02g0265700AK100882.1-Hypothetical protein2e+0At5g54840SGP1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.798.1GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigma
7.097.4GSM154937Root_tZ-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in rice
6.497.2GSM154938Root_tZ-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in rice
5.696.9GSM154833Root_tZ-treatment_30min_replicate 1GSE6719Cytokinin responsive genes in rice
4.095.9GSM149411Rice Bala 0ppm Arsenate (Control) Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
3.995.8GSM173089Rice MH63 Control3GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
3.795.6GSM173080Rice MH63 Control2GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
3.294.9GSM173091Rice OsSRT1 RNAi transgenic line LM1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
3.294.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.094.6GSM100444Rice Bala 0ppm Arsenate (Control) Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-140Os04g0185500AK064939.1-Zn-finger, RING domain containing protein2e-12At5g42940zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.017e-138Os01g0195200AK105501.1-Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1)3e-10At2g20300ALE2 (Abnormal Leaf Shape 2)C.G.S.X.
0.013e+036Os02g0817000AK099758.1-Homeodomain-like containing protein2e+0At4g08875-C.G.S.X.
0.007e-138Os09g0281900AK121112.1-Hypothetical protein1e-11At3g04740SWP (STRUWWELPETER)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-656Arabidopsis thalianaAt2g15530816045zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBV---C.G.S.X.
0.035e-757Glycine maxGmaAffx.7280.1.S1_atAW459314--8e-9At4g34040zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.194e-67256Hordeum vulgareContig9526_atContig9526--2e-6At4g34040zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.045e-448Populus trichocarpaPtpAffx.6691.1.S1_atCV267640hypothetical protein-1e-7At2g15530zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e-242Triticum aestivumTa.2710.2.S1_atCA734795--6e-1At5g01530chlorophyll A-B binding protein CP29 (LHCB4)C.G.S.X.
0.024e-446Vitis vinifera1619939_atCB971326--2e+1At5g43430ETFBETAC.G.S.X.
0.232e-71270Zea maysZm.16968.1.S1_atAY106536.1zinc finger, C3HC4 type family protein-2e-3At4g34040zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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