CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0632500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os04g0632500 AF403128.1 - S-locus receptor-like kinase RLK11 4e-4 At4g21390 B120 S.X. H.G.
0.16 11.3 Os01g0332001 9629.m02200 - - 4e+0 At1g13195 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.06 3.0 Os08g0242500 9636.m01440 - - 7e-1 At1g52300 60S ribosomal protein L37 (RPL37B) S.X. H.G.
0.03 1.4 Os09g0363200 AK109626.1 - The start codon is not identified. 1e-2 At4g20290 unknown protein S.X. H.G.
0.02 1.0 Os11g0492700 9639.m02716 - Esterase/lipase/thioesterase domain containingprotein 1e-3 At4g37140 MEE69 (MATERNAL EFFECT EMBRYO ARREST 69) S.X. H.G.
0.02 1.0 Os01g0362800 AK071457.1 - Hypothetical protein 2e+0 At5g39690 ANAC093 (Arabidopsis NAC domain containing protein 93) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
52.2 99.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.7 99.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.3 99.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.2 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.5 99.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.7 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.5 99.6 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.0 99.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 0 2490 Os04g0632400 AK068530.1 - - 1e-1 At1g76130 AMY2 (ALPHA-AMYLASE-LIKE 2) C.G. S.X.
0.30 9e-130 466 Os04g0631800 AF403126.1 - Receptor-like protein kinase 5 1e-6 At3g45860 receptor-like protein kinase, putative C.G. S.X.
0.28 3e-80 301 Os04g0632100 AF403127.1 - - 9e-8 At4g21370 S-locus protein kinase, putative C.G. S.X.
0.25 5e-76 287 Os04g0633300 9632.m05253 - S-locus glycoprotein family protein 3e-7 At4g21380 ARK3 (A. THALIANA RECEPTOR KINASE 3) C.G. S.X.
0.24 8e-81 303 Os04g0632300 AK064596.1 - Receptor-like protein kinase 6 8e-1 At5g58030 transport protein particle (TRAPP) component Bet3 family protein C.G. S.X.
0.23 9e-90 333 Os04g0226600 AK119282.1 - Receptor-like protein kinase 4 6e-6 At1g11280 S-locus protein kinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 4e-4 48 Arabidopsis thaliana At4g21390 827891 B120 F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVA - - - C.G. S.X.
0.08 9e-9 63 Glycine max GmaAffx.81992.1.S1_at BI471624 - - 2e-11 At4g23180 CRK10 (CYSTEINE-RICH RLK10) C.G. S.X.
0.16 5e-42 173 Hordeum vulgare Contig25378_at Contig25378 - - 9e-18 At4g21390 B120 C.G. S.X.
0.08 1e-11 73 Populus trichocarpa PtpAffx.224766.1.S1_at pmrna43603 hypothetical protein - 5e-4 At4g00960 protein kinase family protein C.G. S.X.
0.20 2e-92 341 Triticum aestivum TaAffx.77639.1.S1_at CA744867 - - 1e-3 At4g23180 CRK10 (CYSTEINE-RICH RLK10) C.G. S.X.
0.04 7e-3 42 Vitis vinifera 1615446_at CF210295 hypothetical protein LOC100267115 - 3e-8 At4g03230 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding C.G. S.X.
0.06 1e-11 71 Zea mays Zm.16280.1.A1_at CO527119 receptor-like kinase - 4e-13 At4g21390 B120 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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