CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0618700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 73.7 Os04g0618700 AK120799.1 - Protein kinase domain containing protein 2e+0 At3g56210 binding S.X. H.G.
0.80 94.6 Os12g0518200 AK070844.1 - Protein of unknown function DUF6 domain containingprotein 3e+0 At4g26290 unknown protein S.X. H.G.
0.67 87.2 Os01g0160800 AB051108.1 - Protein synthesis inhibitor II (EC 3.2.2.22)(Ribosome-inactivating protein II) (rRNA N-glycosidase) 7e-1 At2g43570 chitinase, putative S.X. H.G.
0.50 68.0 Os01g0963000 AK109480.1 - Peroxidase BP 1 precursor 6e-1 At5g40150 peroxidase, putative S.X. H.G.
0.08 4.2 Os02g0605900 AK064754.1 - Chitinase (EC 3.2.1.14) A 5e-1 At3g54420 ATEP3 S.X. H.G.
0.03 1.4 Os11g0212900 AK111542.1 - Hypothetical protein 4e-4 At5g55630 ATKCO1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.8 99.6 GSM421668 XOC, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
25.8 99.5 GSM421670 XOC, 2 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
23.9 99.4 GSM421687 XOO, 2 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
22.5 99.3 GSM421707 MOCK, 2 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
21.7 99.2 GSM421709 MOCK, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
21.2 99.2 GSM159208 Seed (S1, 0 - 2 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
20.4 99.1 GSM421688 XOO, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
16.0 98.7 GSM159209 Seed (S1, 0 - 2 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
12.2 98.3 GSM421689 XOO, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.3 98.1 GSM159207 Seed (S1, 0 - 2 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-44 182 Os03g0365200 AK099802.1 - Peptidase C48, SUMO/Sentrin/Ubl1 family protein 3e-2 At2g43110 unknown protein C.G. S.X.
0.04 4e-43 178 Os12g0228400 AK120234.1 - Chaperonin CPN60-1, mitochondrial precursor(HSP60-1) 3e-2 At3g23990 HSP60 (HEAT SHOCK PROTEIN 60) C.G. S.X.
0.04 2e-36 157 Os10g0210500 AK062163.1 - Protein of unknown function DUF6 domain containingprotein 1e+0 At1g44800 nodulin MtN21 family protein C.G. S.X.
0.04 2e-35 153 Os12g0486800 AK120219.1 - Conserved hypothetical protein 1e+0 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) C.G. S.X.
0.04 2e-32 143 Os01g0686100 AK064922.1 - Conserved hypothetical protein 2e+0 At1g79130 auxin-responsive family protein C.G. S.X.
0.04 9e-32 141 Os04g0602900 AK065982.1 - Farnesyl cysteine carboxyl methyltransferase-likeprotein 4e-1 At5g07890 myosin heavy chain-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e+0 36 Arabidopsis thaliana At3g56210 824787 binding F:binding;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.01 3e-3 46 Glycine max Gma.9001.1.S1_at AI855616 - - 1e-1 At3g48880 F-box family protein C.G. S.X.
0.03 4e-3 44 Hordeum vulgare Contig22773_at Contig22773 - - 1e+0 At3g20530 protein kinase family protein C.G. S.X.
0.01 7e-1 38 Populus trichocarpa PtpAffx.218328.1.S1_at pmrna33899 hypothetical protein - 2e+0 At1g55770 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.04 3e-15 85 Triticum aestivum Ta.19256.1.S1_at CA649318 - - 4e+0 At4g16750 DRE-binding transcription factor, putative C.G. S.X.
0.01 4e-2 40 Vitis vinifera 1617596_at CF201215.1 hypothetical protein LOC100264999 - 1e+0 At4g32590 ferredoxin-related C.G. S.X.
0.03 1e-2 42 Zea mays Zm.11950.1.A1_at CF632814 - - 2e-6 At3g19700 IKU2 (HAIKU2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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