Gene omics information

Query gene ID Os04g0610900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7793.1Os04g0610900AK120898.1-EDR19e-5At4g24480serine/threonine protein kinase, putativeS.X.H.G.
0.8094.6Os04g0588700AK099941.1-ABC transporter, transmembrane region domaincontaining protein9e-6At3g59140ATMRP14S.X.H.G.
0.6787.2Os01g0680200AK121881.1--2e-1At1g54215proline-rich family proteinS.X.H.G.
0.6181.2Os12g0490000CA762266-Mitochodrial transcription terminationfactor-related family protein5e+0At4g08170inositol 1,3,4-trisphosphate 5/6-kinase family proteinS.X.H.G.
0.3338.8Os12g0454800AY572461.1-Histidine kinase7e-3At5g10530lectin protein kinase, putativeS.X.H.G.
0.2625.6Os02g0579600AY177696.1-Transcription factor MADS277e-19At3g57230AGL16 (AGAMOUS-LIKE 16)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.298.4GSM100440Rice Azucena 0ppm Arsenate (Control) Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
12.998.4GSM100439Rice Azucena 0ppm Arsenate (Control) Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
11.298.2GSM100444Rice Bala 0ppm Arsenate (Control) Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
10.598.1GSM262004IAC165, 4 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.398.1GSM149412Rice Bala 1ppm Arsenate Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
10.098.0GSM100443Rice Bala 0ppm Arsenate (Control) Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
9.998.0GSM100446Rice Bala 1ppm Arsenate Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
9.898.0GSM262005IAC165, 4 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.597.9GSM262009IAC165, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.597.9GSM262007IAC165, 11 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-22109Os07g02787339640.m01009--2e-1At5g47210nuclear RNA-binding protein, putativeC.G.S.X.
0.043e-1275Os02g0527600CB656998-MAP3K delta-1 protein kinase (Fragment)1e-65At5g03730CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1)C.G.S.X.
0.033e-346Os09g05665009637.m03362-Protein kinase family protein1e-26At5g03730CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1)C.G.S.X.
0.028e-757Os03g0290300AK058242.1-Fatty acid desaturase domain containing protein8e-37At5g05580FAD8 (FATTY ACID DESATURASE 8)C.G.S.X.
0.013e-346Os02g01752009630.m00738--6e-5At5g23730nucleotide bindingC.G.S.X.
0.013e-346Os03g0314100AK064890.1-Pre-mRNA splicing factor RNA helicase PRP43(Helicase JA1)6e-74At2g47250RNA helicase, putativeC.G.S.X.
0.013e-346Os10g0511600AK073197.1-Peptidase S28 family protein5e-12At4g36195serine carboxypeptidase S28 family proteinC.G.S.X.
0.011e-244Os03g02053009631.m00991--1e-10At2g14760basic helix-loop-helix protein / bHLH proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.049e-550Arabidopsis thalianaAt4g24480828550serine/threonine protein kinase, putativeF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVA---C.G.S.X.
0.071e-759Glycine maxGmaAffx.27488.1.S1_atAW311080--1e-29At4g24480serine/threonine protein kinase, putativeC.G.S.X.
0.350737Hordeum vulgareContig21634_atContig21634--3e-3At5g03730CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1)C.G.S.X.
0.021e-140Populus trichocarpaPtpAffx.210396.1.S1_atpmrna20430hypothetical protein-8e-104At1g73660protein kinase family proteinC.G.S.X.
0.282e-123444Triticum aestivumTaAffx.110897.1.S1_atCA652064putative ethylene constitutive triple response protein-2e-2At4g24480serine/threonine protein kinase, putativeC.G.S.X.
0.024e-136Vitis vinifera1611685_atCF207065hypothetical protein LOC100242423-1e-87At1g79570protein kinase family proteinC.G.S.X.
0.291e-75284Zea maysZm.7500.1.A1_atCA404174--1e-10At4g24480serine/threonine protein kinase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006779The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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