Gene omics information

Query gene ID Os04g0604900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.7Os04g0604900AK059203.1-Xyloglucan endotransglycosylase (Fragment)2e-10At5g57540xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeS.X.H.G.
0.4863.7Os01g0248000AK073588.1-Stigma-specific protein Stig1 family protein5e-1At1g67035unknown proteinS.X.H.G.
0.4762.3Os12g0640700AK108649.1-N/apple PAN domain containing protein8e-1At5g44500small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putativeS.X.H.G.
0.4458.1Os04g0552200AF261273.1-Beta-expansin 52e+0At5g48660-S.X.H.G.
0.4355.4Os02g04480009630.m02338-Protein of unknown function DUF296 domaincontaining protein8e-6At4g22810DNA-binding protein-relatedS.X.H.G.
0.4253.9Os08g0493800AK110374.1-Protein kinase domain containing protein2e-3At5g56040leucine-rich repeat protein kinase, putativeS.X.H.G.
0.4051.1Os09g0420300AK120582.1-Methyladenine glycosylase family protein1e-5At1g80850methyladenine glycosylase family proteinS.X.H.G.
0.3745.0Os07g01044009635.m00042-Haem peroxidase, plant/fungal/bacterial familyprotein2e-3At5g40150peroxidase, putativeS.X.H.G.
0.3541.7Os01g0653200AK110920.1-Glycosyl transferase, group 1 domain containingprotein9e-1At1g71910unknown proteinS.X.H.G.
0.3338.8Os10g0498100C99392-Epoxide hydrolase family protein1e-1At2g26740ATSEH (Arabidopsis thaliana soluble epoxide hydrolase)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
24.899.5GSM149409Rice Azucena 0ppm Arsenate (Control) Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
18.999.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.499.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.398.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.298.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.998.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.398.7GSM159179Root, 7-day-old Seedling, biological rep 3GSE6893Expression data for reproductive development in rice
15.098.6GSM100440Rice Azucena 0ppm Arsenate (Control) Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
13.898.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.398.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.299e-51202Os06g0696400AK104912.1-Xyloglycan endo-transglycosylase precursor7e-10At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)C.G.S.X.
0.251e-40169Os06g0696600AK105934.1-Xyloglucan endo-transglycosylase homolog9e-3At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.222e-20101Os08g0237000AB110604.1-End-xyloglucan transferase (EC 2.4.1.-)1e-2At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.212e-30135Os06g0697000AK120345.1-Xyloglucan endotransglucosylase/hydrolase proteinA precursor (EC 2.4.1.207) (VaXTH1)3e-12At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.176e-21103Os06g06965009634.m04702-Xyloglucan endo-transglycosylase precursor7e-3At5g57540xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
0.094e-1997Os08g02378009636.m01388-Xyloglucan endotransglycosylase (Fragment)5e-4At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-1067Arabidopsis thalianaAt5g57540835858xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, apoplast, cell wall;PFBO---C.G.S.X.
0.064e-344Glycine maxGma.117.1.S1_atAB083025.1syringolide-induced protein 19-1-5-2e-13At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.385e-77287Hordeum vulgareContig12692_s_atContig12692--2e-4At5g57540xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
0.122e-757Populus trichocarpaPtp.4442.1.S1_atCV226738hypothetical protein-2e-31At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.352e-59230Triticum aestivumTa.13337.2.S1_x_atCA680143--6e-4At5g57540xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
0.093e-1271Vitis vinifera1619068_atCF215954hypothetical protein LOC100250461-1e-13At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.196e-24111Zea maysZm.704.1.S1_atU15781.1xyloglucan endotransglycosylase homolog1-3e-6At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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