Gene omics information

Query gene ID Os04g0594400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4458.1Os04g0594400AK067019.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-1At4g17720RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.4051.1Os04g0608900AK111698.1-Serine/threonine/tyrosine kinase3e-10At4g31170protein kinase family proteinS.X.H.G.
0.3846.9Os04g0672900AK062248.1-Conserved hypothetical protein6e-8At4g31080unknown proteinS.X.H.G.
0.2625.6Os10g0554100AK071048.1-Oxysterol-binding protein family protein8e-36At2g31030ORP1B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1B)S.X.H.G.
0.2524.1Os05g0585500AK070346.1-Calcium-dependent protein kinase1e-12At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)S.X.H.G.
0.2117.9Os02g0827200AB091673.1-Sucrose transporter1e-18At2g02860SUT2 (SUCROSE TRANSPORTER 2)S.X.H.G.
0.1915.1Os06g0229200AK070606.1-Glycosyl transferase, family 31 protein7e-9At1g26810GALT1 (GALACTOSYLTRANSFERASE1)S.X.H.G.
0.105.7Os03g0186800AK100356.1-Modifier of rudimentary (Mod family protein6e-4At2g36680-S.X.H.G.
0.052.5Os07g0124600AK073437.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein7e-1At1g54215proline-rich family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.497.9GSM159189Young inflorescence (P1, upto 3 cm), biological rep 1GSE6893Expression data for reproductive development in rice
8.197.7GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
7.997.6GSM375767gid1-3_ shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
7.097.4GSM375765gid1-3_ shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
6.397.2GSM159197Inflorescence (P3, 5 - 10 cm), biological rep 3GSE6893Expression data for reproductive development in rice
6.197.1GSM154831Root_DMSO-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in rice
6.097.0GSM159191Young inflorescence (P1, upto 3 cm), biological rep 3GSE6893Expression data for reproductive development in rice
5.696.9GSM375766gid1-3_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
5.496.8GSM154829Root_DMSO-treatment_30min_replicate 1GSE6719Cytokinin responsive genes in rice
5.496.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.174e-1997Os04g0624800AK070522.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-1At4g17720RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.092e-656Os06g0112400AK099246.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein1e-11At5g16840BPA1 (BINDINGPARTNEROFACD11 1)C.G.S.X.
0.023e-138Os07g02031009635.m00999--3e+0At1g50640ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3)C.G.S.X.
0.021e+036Os12g01995009640.m00915--3e+0At3g47920unknown proteinC.G.S.X.
0.013e-138Os09g0478100AK103810.1-Cellulose synthase family protein7e-2At1g55850ATCSLE1C.G.S.X.
0.013e-138Os09g0510500AK066188.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein2e-16At5g50915basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.011e+036Os04g0508600AK120762.1-Lung seven transmembrane receptor family protein2e-1At5g42090-C.G.S.X.
0.015e+034Os11g05584009639.m03185-Leucine-rich repeat, plant specific containingprotein2e-1At1g66830leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-138Arabidopsis thalianaAt4g17720827493RNA recognition motif (RRM)-containing proteinF:oxidoreductase activity, nucleotide binding, nucleic acid binding;P:oxidation reduction;C:unknown;POFMBVA---C.G.S.X.
0.046e-240Glycine maxGma.11367.1.S1_atAW598213--8e-3At5g16840BPA1 (BINDINGPARTNEROFACD11 1)C.G.S.X.
0.600843Hordeum vulgareContig12620_atContig12620--4e-2At5g16840BPA1 (BINDINGPARTNEROFACD11 1)C.G.S.X.
0.087e-859Populus trichocarpaPtpAffx.4464.1.S1_a_atCV240296--2e-7At4g17720RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.281e-73278Triticum aestivumTa.19495.2.S1_atCA641373--4e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinC.G.S.X.
0.028e-134Vitis vinifera1620116_atCF210995hypothetical protein LOC100262620-3e-4At5g47140zinc finger (GATA type) family proteinC.G.S.X.
0.450688Zea maysZm.6866.1.S1_atCO526072nucleic acid binding protein-2e-1At4g17720RNA recognition motif (RRM)-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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