Gene omics information

Query gene ID Os04g0577500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4458.1Os04g0577500AK065648.1-TatD-related deoxyribonuclease family protein2e-4At5g17570tatD-related deoxyribonuclease family proteinS.X.H.G.
0.6382.7Os12g0103000AK068622.1-Mitochondrial substrate carrier family protein3e-16At2g35800mitochondrial substrate carrier family proteinS.X.H.G.
0.5777.0Os07g0673700AK071934.1-Cyclin-like F-box domain containing protein4e+0At3g43583unknown proteinS.X.H.G.
0.4458.1Os03g0684000AK105025.2-Zn-finger, GATA type domain containing protein1e-2At3g21175ZML1 (ZIM-LIKE 1)S.X.H.G.
0.2727.5Os12g0193100AK068584.1-Subtilisin inhibitor I (ASI-I) [Contains:Subtilisin inhibitor II (ASI-II)]6e-1At3g61840unknown proteinS.X.H.G.
0.2219.4Os04g0278900AK108886.1-Dihydrouridine synthase, DuS family protein2e-3At3g63510FAD binding / catalytic/ tRNA dihydrouridine synthaseS.X.H.G.
0.2016.5Os02g01234009630.m00227-Conserved hypothetical protein1e+0At1g73970unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.697.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
7.497.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.897.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.497.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.097.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.897.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.696.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.596.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
5.296.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.296.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-344Os06g0274300CR291240-Leucine-rich repeat, plant specific containingprotein3e-2At1g29724protein bindingC.G.S.X.
0.025e-344Os05g0195200AK063896.1-Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein1e-1At3g57950unknown proteinC.G.S.X.
0.025e-344Os10g0109300AK104730.1-Peroxidase (EC 1.11.1.7)5e-5At1g14540anionic peroxidase, putativeC.G.S.X.
0.011e-346Os10g0135500AK099992.1-Cyclin-like F-box domain containing protein5e-3At1g75550glycine-rich proteinC.G.S.X.
0.012e-242Os07g0119400AK102922.1-Pectinesterase like protein7e-8At5g66920sks17 (SKU5 Similar 17)C.G.S.X.
0.012e-242Os07g0190600AK070975.1-Nucleic acid-binding OB-fold domain containingprotein3e-1At3g05490RALFL22 (ralf-like 22)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-448Arabidopsis thalianaAt5g17570831623tatD-related deoxyribonuclease family proteinF:endodeoxyribonuclease activity, producing 5'-phosphomonoesters, deoxyribonuclease activity;P:biological_process unknown;C:cellular_component unknown;BOMFAP---C.G.S.X.
0.029e-136Glycine maxGmaAffx.68424.1.S1_atBI425883--4e-19At5g18590kelch repeat-containing proteinC.G.S.X.
0.560636Hordeum vulgareContig8039_atContig8039--2e-7At5g17570tatD-related deoxyribonuclease family proteinC.G.S.X.
0.132e-757Populus trichocarpaPtpAffx.46537.1.S1_atDN493147hypothetical protein-1e-7At5g17570tatD-related deoxyribonuclease family proteinC.G.S.X.
0.379e-59228Triticum aestivumTaAffx.101447.1.S1_atCD919717--1e-7At5g17570tatD-related deoxyribonuclease family proteinC.G.S.X.
0.028e-134Vitis vinifera1610493_atBQ799159hypothetical protein LOC100242667-5e-47At5g27720emb1644 (embryo defective 1644)C.G.S.X.
0.027e-238Zea maysZmAffx.1410.1.S1_at40794996-85--4e+0At2g07674unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006366The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs).
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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