CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0570800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os04g0570800 AK099906.1 - Putative methyltransferase DUF248 family protein 1e-4 At4g00750 dehydration-responsive family protein S.X. H.G.
0.50 68.0 Os06g0566500 AK063099.1 - Hypothetical protein 2e+0 At5g13910 LEP (LEAFY PETIOLE) S.X. H.G.
0.46 60.9 Os04g0563000 CA763943 - Conserved hypothetical protein 2e+0 At5g63595 FLS4 (FLAVONOL SYNTHASE 4) S.X. H.G.
0.40 51.1 Os01g0243400 AK070651.1 - Hypothetical protein 1e+0 At1g69410 ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3) S.X. H.G.
0.18 13.7 Os10g0479900 AU086009 - Transcriptional factor B3 family protein 1e-6 At2g28350 ARF10 (AUXIN RESPONSE FACTOR 10) S.X. H.G.
0.15 10.3 Os05g0272900 AK107093.1 - B-cell receptor-associated 31-like family protein 1e-1 At1g11905 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.4 99.4 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
21.6 99.2 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
19.1 99.0 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
8.5 97.7 GSM195230 5d-seed GSE7951 Genome-wide gene expression profiling of rice stigma
5.0 96.6 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
4.5 96.3 GSM159199 Inflorescence (P4, 10 - 15 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
4.4 96.2 GSM159203 Inflorescence (P5, 15 - 22 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
4.3 96.1 GSM149411 Rice Bala 0ppm Arsenate (Control) Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
4.3 96.1 GSM159202 Inflorescence (P5, 15 - 22 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
4.0 95.9 GSM159200 Inflorescence (P4, 10 - 15 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 4e-15 85 Os06g0128100 CA766672 - Putative methyltransferase DUF248 family protein 2e-8 At2g45750 dehydration-responsive family protein C.G. S.X.
0.08 1e-24 117 Os10g0510400 AK100601.1 - Putative methyltransferase DUF248 family protein 1e-3 At1g33170 dehydration-responsive family protein C.G. S.X.
0.02 1e-8 63 Os04g0218400 AK065174.1 - ERD3 protein 1e-3 At1g31850 dehydration-responsive protein, putative C.G. S.X.
0.02 1e-2 44 Os06g0103900 AK111870.1 - Putative methyltransferase DUF248 family protein 3e-10 At4g10440 dehydration-responsive family protein C.G. S.X.
0.01 5e-2 42 Os11g0441900 AK109632.1 - Protein kinase domain containing protein 8e-1 At4g39260 GR-RBP8 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 1e-4 50 Arabidopsis thaliana At4g00750 825923 dehydration-responsive family protein F:unknown;P:biological_process unknown;C:Golgi apparatus;PBO - - - C.G. S.X.
0.14 4e-20 101 Glycine max GmaAffx.41555.1.S1_at AW781650 - - 3e-16 At2g45750 dehydration-responsive family protein C.G. S.X.
0.56 0 1586 Hordeum vulgare Contig4811_at Contig4811 - - 5e-3 At2g45750 dehydration-responsive family protein C.G. S.X.
0.07 6e-7 57 Populus trichocarpa PtpAffx.210755.1.S1_at pmrna21101 hypothetical protein - 1e-18 At4g00750 dehydration-responsive family protein C.G. S.X.
0.39 0 868 Triticum aestivum Ta.5430.1.S1_a_at CD889822 - - 5e-5 At4g00750 dehydration-responsive family protein C.G. S.X.
0.05 5e-13 75 Vitis vinifera 1607184_at CB981964 hypothetical protein LOC100258938 - 8e-24 At4g00750 dehydration-responsive family protein C.G. S.X.
0.45 0 910 Zea mays Zm.1344.1.A1_at CA402844 - - 9e-7 At4g00750 dehydration-responsive family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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