Gene omics information

Query gene ID Os04g0566400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.7Os04g0566400CB669008-Zn-finger, C2H2 type domain containing protein9e-30At1g14580zinc finger (C2H2 type) family proteinS.X.H.G.
0.3541.7Os01g0107900AK070363.1-Hypothetical protein2e-2At1g27510-S.X.H.G.
0.3236.3Os02g0793900AK102581.1-Conserved hypothetical protein4e-11At1g80940unknown proteinS.X.H.G.
0.2931.1Os03g0822200AK069405.1-Conserved hypothetical protein7e-16At5g02240binding / catalytic/ coenzyme bindingS.X.H.G.
0.2727.5Os04g0534500AK105805.1-Conserved hypothetical protein3e+0At5g14550unknown proteinS.X.H.G.
0.2625.6Os02g0125100AK101889.1-Cis-homoaconitase family protein1e-24At4g13430IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1)S.X.H.G.
0.2524.1Os04g0467700AK101835.1-Indole-3-glycerol phosphate synthase, chloroplastprecursor (EC 4.1.1.48) (IGPS)1e-11At5g48220indole-3-glycerol phosphate synthase, putativeS.X.H.G.
0.1712.6Os10g0415600AK066606.1-Acylamino acid-releasing enzyme4e-1At4g14570acylaminoacyl-peptidase-relatedS.X.H.G.
0.1712.6Os02g0830100AK065077.1-Oligopeptidase A7e-24At5g65620peptidase M3 family protein / thimet oligopeptidase family proteinS.X.H.G.
0.1712.6Os08g0562700AK066773.1-Aminopeptidase N4e-44At1g63770peptidase M1 family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.898.6GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
13.598.5GSM35713314-day-old seedling, rep 2GSE14275Expression data for heat shock in rice seedlings
7.597.5GSM302917endo6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
6.097.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
5.096.6GSM173093Rice OsSRT1 RNAi transgenic line LM2GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
4.996.5GSM375767gid1-3_ shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
4.696.3GSM375765gid1-3_ shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
4.696.3GSM375766gid1-3_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
4.496.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
4.296.0GSM173091Rice OsSRT1 RNAi transgenic line LM1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.310753Os02g0672100AK120603.1-Zn-finger, C2H2 type domain containing protein7e-24At1g14580zinc finger (C2H2 type) family proteinC.G.S.X.
0.186e-165583Os08g0554400AK101181.1-Zn-finger, C2H2 type domain containing protein4e-25At1g14580zinc finger (C2H2 type) family proteinC.G.S.X.
0.179e-152539Os09g0555700AK061264.1-Zn-finger, C2H2 type domain containing protein2e-25At1g14580zinc finger (C2H2 type) family proteinC.G.S.X.
0.024e-448Os02g05147009630.m02978-Dihydrolipoamide succinyltransferase familyprotein1e-11At5g550702-oxoacid dehydrogenase family proteinC.G.S.X.
0.014e-448Os01g0859500AK101338.1-Ocs-element binding factor 3.23e-4At5g07600oleosin / glycine-rich proteinC.G.S.X.
0.014e-448Os06g0108900AK101029.1-Homeobox domain containing protein1e-12At5g41410BEL1 (BELL 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.139e-30133Arabidopsis thalianaAt1g14580838020zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;MOPFB---C.G.S.X.
0.148e-25117Glycine maxPsAffx.psHB034xB01f_atPsAffx.psHB034xB01f--3e-11At1g14580zinc finger (C2H2 type) family proteinC.G.S.X.
0.373e-83309Hordeum vulgareContig6198_atContig6198--2e-1At4g33660unknown proteinC.G.S.X.
0.063e-1275Populus trichocarpaPtpAffx.87589.1.S1_atAJ772522hypothetical protein-5e-40At1g14580zinc finger (C2H2 type) family proteinC.G.S.X.
0.342e-71272Triticum aestivumTa.27020.1.S1_atCD891344--3e+0At3g63040unknown proteinC.G.S.X.
0.018e-342Vitis vinifera1613105_atCB002608--2e+0At5g19490DNA binding / sequence-specific DNA bindingC.G.S.X.
0.134e-36153Zea maysZm.372.1.S1_atAF058757.1indeterminate growth1-9e-7At1g14580zinc finger (C2H2 type) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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