CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0561500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.84 96.0 Os04g0561500 AK065953.1 - Prolyl endopeptidase (EC 3.4.21.26) (Post-prolinecleaving enzyme) (PE) 1e-19 At1g76140 serine-type endopeptidase/ serine-type peptidase S.X. H.G.
0.71 89.6 Os06g0288200 AK071127.1 - Hypothetical protein 8e-1 At2g47400 CP12-1 S.X. H.G.
0.71 89.6 Os06g0102100 AK099468.1 - Cytochrome P450 family protein 1e+0 At5g46020 unknown protein S.X. H.G.
0.71 89.6 Os07g0510500 AK068586.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 4e-3 At3g21800 UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8) S.X. H.G.
0.64 83.4 Os12g0115700 AK099443.1 - Chalcone-flavanone isomerase family protein 3e+0 At4g04745 unknown protein S.X. H.G.
0.63 82.7 Os02g0697400 AK105636.1 - 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)(4-coumaroyl-CoA synthase 2) 8e-5 At1g65060 4CL3 S.X. H.G.
0.63 82.7 Os02g0589000 AK066288.1 - Lecithin:cholesterol acyltransferase familyprotein 8e-1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) S.X. H.G.
0.43 55.4 Os08g0375400 AK108186.1 - Plant disease resistance response protein familyprotein 6e+0 At5g61030 GR-RBP3 (glycine-rich RNA-binding protein 3) S.X. H.G.
0.19 15.1 Os04g0101400 AK100972.1 - Cytochrome P450 family protein 1e-2 At5g06900 CYP93D1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.9 99.5 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
20.6 99.1 GSM421684 XOC, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
20.6 99.1 GSM421697 XOO, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
19.5 99.1 GSM421723 MOCK, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
17.6 98.9 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
16.4 98.8 GSM421720 MOCK, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.6 98.6 GSM421699 XOO, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.0 98.5 GSM421711 MOCK, 4 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.4 98.5 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.9 98.3 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-8 63 Os01g0663050 NM_192502.1 - - 6e+0 At5g51170 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 1e-19 99 Arabidopsis thaliana At1g76140 843946 serine-type endopeptidase/ serine-type peptidase F:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:chloroplast;OBMPAF - - - C.G. S.X.
0.03 1e-4 50 Glycine max PsAffx.CL1226Contig1_at PsAffx.CL1226Contig1 - - 2e+0 At1g12440 zinc finger (AN1-like) family protein C.G. S.X.
0.20 1e-82 307 Hordeum vulgare Contig15056_at Contig15056 - - 3e-17 At1g20380 prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative C.G. S.X.
0.04 2e-16 89 Populus trichocarpa Ptp.5085.1.S1_s_at CV227488 hypothetical protein - 3e-36 At1g76140 serine-type endopeptidase/ serine-type peptidase C.G. S.X.
0.25 7e-86 319 Triticum aestivum TaAffx.64664.1.S1_at BJ282283 - - 1e+0 At3g60660 unknown protein C.G. S.X.
0.08 3e-30 133 Vitis vinifera 1619547_at CD719431 - - 2e-39 At1g20380 prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative C.G. S.X.
0.07 7e-7 56 Zea mays Zm.9529.1.A1_at CA399003 hypothetical protein LOC100191488 - 3e-35 At1g20380 prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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