Gene omics information

Query gene ID Os04g0547600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9Os04g0547600AY339379.1-Pathogenesis-related transcriptional factor andERF domain containing protein3e-3At4g27950CRF4 (CYTOKININ RESPONSE FACTOR 4)S.X.H.G.
0.6382.7Os10g0466600NM_196926.1--9e-1At3g55490-S.X.H.G.
0.5877.0Os10g05684009638.m03825--3e+0At5g42635glycine-rich proteinS.X.H.G.
0.5573.7Os11g02076009639.m00957-Myb, DNA-binding domain containing protein7e-4At1g73410MYB54 (MYB DOMAIN PROTEIN 54)S.X.H.G.
0.5573.7Os07g02430009635.m01377-Conserved hypothetical protein2e+0At4g34131UGT73B3 (UDP-glucosyl transferase 73B3)S.X.H.G.
0.5471.9Os04g05382009632.m04376--5e-1At4g39260GR-RBP8S.X.H.G.
0.5371.3Os11g01507009639.m00448-Protein kinase family protein4e-2At3g12690AGC1.5 (AGC KINASE 1.5)S.X.H.G.
0.5269.6Os11g0702000AK106678.1-Conserved hypothetical protein7e+0At5g52990vesicle-associated membrane protein-relatedS.X.H.G.
0.5068.0Os10g0346700NM_195908.1--5e-1At4g04614unknown proteinS.X.H.G.
0.4964.4Os02g04906009630.m02756--4e+0At4g09840unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
68.099.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
31.099.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
26.499.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.699.4GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.799.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.499.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.799.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.899.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.899.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.499.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.459e-113408Os04g05475009632.m04453--5e-4At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.161e-80301Os02g0655200AY339378.1-Ethylene responsive element binding factor3(OsERF3)2e-1At4g27950CRF4 (CYTOKININ RESPONSE FACTOR 4)C.G.S.X.
0.154e-38161Os10g0562900AY341826.1-Pathogenesis-related transcriptional factor andERF domain containing protein6e-1At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.141e-31139Os03g0150200AY339376.1-Ethylene-responsive element binding protein8e-2At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.118e-30133Os04g0257500AK107745.1-Ethylene-responsive element binding protein7e-3At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.092e-21105Os02g0654700AK073812.1-Ethylene-responsive element binding protein3e-3At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-344Arabidopsis thalianaAt4g27950828908CRF4 (CYTOKININ RESPONSE FACTOR 4)encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.---C.G.S.X.
0.127e-1169Glycine maxGmaAffx.93567.1.S1_atCF808176--1e-3At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
0.286e-49194Hordeum vulgareContig17873_atContig17873--4e-1At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.044e-344Populus trichocarpaPtpAffx.221100.1.S1_atpmrna37697AP2/ERF domain-containing transcription factor-9e-20At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)C.G.S.X.
0.169e-1995Triticum aestivumTaAffx.81079.1.S1_atCA689720--6e-2At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.106e-857Vitis vinifera1618661_s_atCF518549hypothetical protein LOC100254504-1e-1At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)C.G.S.X.
0.153e-44178Zea maysZm.17956.1.A1_atCF637428--2e+0At3g20570plastocyanin-like domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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