Gene omics information

Query gene ID Os04g0546000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9Os04g05460009632.m04444--3e+0At4g20690unknown proteinS.X.H.G.
0.7391.1Os04g03419009632.m02582--3e-2At5g05790myb family transcription factorS.X.H.G.
0.6382.7Os04g0597700AK105711.1-Conserved hypothetical protein1e-3At2g02040PTR2 (PEPTIDE TRANSPORTER 2)S.X.H.G.
0.6181.2Os01g0798600NM_190911.1--3e-3At5g44650unknown proteinS.X.H.G.
0.6079.7Os01g0730100AK064757.1-Cyclin-like F-box domain containing protein1e+1At4g14723-S.X.H.G.
0.5978.0Os01g0360100AK100554.1-Conserved hypothetical protein1e+0At1g04130tetratricopeptide repeat (TPR)-containing proteinS.X.H.G.
0.5877.0Os08g02410509636.m01417--4e+0At5g58020unknown proteinS.X.H.G.
0.5877.0Os11g04957009639.m02731-FAD linked oxidase, N-terminal domain containingprotein1e+0At5g11520ASP3 (ASPARTATE AMINOTRANSFERASE 3)S.X.H.G.
0.5777.0Os05g02786009633.m01808--4e-1At2g36210auxin-responsive family proteinS.X.H.G.
0.5471.9Os10g04359009638.m02562--9e+0At5g65180-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
51.899.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
40.999.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
35.799.8GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
34.699.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
33.299.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.999.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.799.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.999.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.099.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.098.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.301e-62240Os04g0650700AK058733.1-L-asparaginase (L-asparagine amidohydrolase)1e-1At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeC.G.S.X.
0.124e-756Os03g0597600AK069458.1-L-asparaginase (EC 3.5.1.1) (L-asparagineamidohydrolase)4e-2At5g08100L-asparaginase / L-asparagine amidohydrolaseC.G.S.X.
0.042e-344Os04g06254009632.m05180--2e+0At4g30450glycine-rich proteinC.G.S.X.
0.042e+034Os08g01357009636.m00338--2e-1At5g44450methyltransferaseC.G.S.X.
0.021e-138Os07g0585000AK071269.1-C2 domain containing protein1e-5At5g55530C2 domain-containing proteinC.G.S.X.
0.024e-136Os08g03285009636.m02344--3e+0At5g37200zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.012e+034Os06g0237400CB666869-Beta-glucanase family protein1e-4At1g10510emb2004 (embryo defective 2004)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt4g20690827816unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;P---C.G.S.X.
0.115e-1271Glycine maxGma.1179.1.S1_atAY096000.1L-asparaginase-5e-39At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeC.G.S.X.
0.281e-31135Hordeum vulgareContig8740_atContig8740--8e-3At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeC.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.41718.1.S1_atBU881184hypothetical protein-3e-12At1g74070peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinC.G.S.X.
0.341e-36153Triticum aestivumTa.3504.1.A1_atCK163751--1e+0At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeC.G.S.X.
0.039e-132Vitis vinifera1619017_atCB345874hypothetical protein LOC100246267-4e+0At5g24890unknown proteinC.G.S.X.
0.039e-236Zea maysZm.9389.1.A1_a_atCO524440catalytic/ protein phosphatase type 2C-6e+0At5g5671060S ribosomal protein L31 (RPL31C)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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