Gene omics information

Query gene ID Os04g0543000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7491.4Os04g0543000AK064119.1-Protein kinase1e-3At2g39110protein kinase, putativeS.X.H.G.
0.3338.8Os04g0537800AK103654.1-Protein of unknown function DUF26 domaincontaining protein4e-2At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)S.X.H.G.
0.2625.6Os03g0127900AK062977.1-Conserved hypothetical protein4e-8At5g51710KEA5S.X.H.G.
0.2625.6Os11g0546300AK121962.1-Patatin family protein3e-9At1g33270patatin-relatedS.X.H.G.
0.2422.4Os08g0128200AK120428.1-Conserved hypothetical protein4e+0At3g49620DIN11 (DARK INDUCIBLE 11)S.X.H.G.
0.2422.4Os05g0150800AK103505.1-C-1-tetrahydrofolate synthase, cytoplasmic (C1-THFsynthase) [Includes: Methylenetetrahydrofolatedehydrogenase (EC 1.5.1.5)3e-18At3g12290tetrahydrofolate dehydrogenase/cyclohydrolase, putativeS.X.H.G.
0.2422.4Os04g0691800CB651732-C2 domain containing protein2e-2At3g23830GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4)S.X.H.G.
0.1813.7Os02g0741300AK120667.1-Glycoside hydrolase, family 47 protein1e-33At1g27520glycoside hydrolase family 47 proteinS.X.H.G.
0.1813.7Os08g0532400AK101608.1-Nodulin-like protein5e-12At3g01930nodulin family proteinS.X.H.G.
0.1712.6Os03g0684000AK105025.2-Zn-finger, GATA type domain containing protein1e-2At3g21175ZML1 (ZIM-LIKE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.899.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
11.598.2GSM278847WuYun3-non-infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
10.398.1GSM278849WuYun3-non-infected, biological rep3GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
10.198.0GSM278855KT95-418-non-infected, biological rep3GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
8.197.7GSM35713314-day-old seedling, rep 2GSE14275Expression data for heat shock in rice seedlings
6.997.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.897.3GSM173093Rice OsSRT1 RNAi transgenic line LM2GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
6.897.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.597.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.997.0GSM278844WuYun3-RSV infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.179e-34147Os02g0650500AK063883.1-Protein kinase-like (Protein serine/threoninekinase)7e-2At1g61590protein kinase, putativeC.G.S.X.
0.109e-74280Os04g0542900AK068610.1-Conserved hypothetical protein2e-1At3g42310unknown proteinC.G.S.X.
0.082e-37159Os06g0714900AK105337.1-Protein kinase domain containing protein6e-2At2g39110protein kinase, putativeC.G.S.X.
0.051e-20103Os09g0533600AK070024.1-Probable serine/threonine-protein kinase NAK (EC2.7.1.37)2e-1At5g35580ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.057e-1067Os06g0703000AK072944.1-Protein kinase domain containing protein5e-5At5g35580ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.043e-965Os03g0364400AK066529.1-Protein kinase domain containing protein4e-3At1g61590protein kinase, putativeC.G.S.X.
0.037e-1067Os02g0777800AK066978.1-Protein kinase domain containing protein2e-9At5g35580ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-346Arabidopsis thalianaAt2g39110818497protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA---C.G.S.X.
0.022e-346Glycine maxGma.542.1.S1_atCD400586--4e-1At4g37790HAT22C.G.S.X.
0.084e-1789Hordeum vulgareContig17408_atContig17408--1e-4At2g39110protein kinase, putativeC.G.S.X.
0.012e+036Populus trichocarpaPtpAffx.101629.1.A1_atCV257257--5e+0At5g02120OHP (ONE HELIX PROTEIN)C.G.S.X.
0.064e-1687Triticum aestivumTaAffx.37633.1.S1_atBJ270861--2e-2At2g39110protein kinase, putativeC.G.S.X.
0.021e+034Vitis vinifera1616189_atCF511570hypothetical protein LOC100260741-6e-18At1g75820CLV1 (CLAVATA 1)C.G.S.X.
0.042e-654Zea maysZmAffx.117.1.A1_atAI665629serine/threonine-protein kinase NAK-8e+0At3g12835unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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