CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0528300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 91.1 Os04g0528300 AK064945.1 - ABC transporter related domain containing protein 2e-12 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) S.X. H.G.
0.67 87.2 Os09g0426800 AK120227.1 - Gl1 protein 3e-1 At4g12950 - S.X. H.G.
0.50 68.0 Os05g0222200 AK068591.1 - ABC transporter 4e-13 At3g21090 ABC transporter family protein S.X. H.G.
0.46 60.9 Os07g0510400 AK119544.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-1 At4g15550 IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE) S.X. H.G.
0.44 58.1 Os05g0489200 AK069135.1 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 2e+0 At2g27300 NTL8 (NTM1-LIKE 8) S.X. H.G.
0.40 51.1 Os12g0411700 BI806808 - ABC transporter related domain containing protein 9e-1 At1g60660 CB5LP (CYTOCHROME B5-LIKE PROTEIN) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.6 98.4 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
12.4 98.3 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
12.2 98.3 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
6.3 97.2 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.2 97.1 GSM421720 MOCK, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.2 97.1 GSM159172 Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
6.0 97.0 GSM159173 Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
5.5 96.8 GSM421700 XOO, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.5 96.8 GSM421684 XOC, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.5 96.8 GSM421689 XOO, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.47 2e-102 375 Os10g0494300 AK072452.1 - ABC transporter 3e-69 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) C.G. S.X.
0.13 6e-23 111 Os05g0222200 AK068591.1 - ABC transporter 4e-13 At3g21090 ABC transporter family protein C.G. S.X.
0.11 3e-163 577 Os04g0528400 AK101159.1 - Hus1-like protein family protein 2e-8 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) C.G. S.X.
0.08 3e-9 65 Os09g0472100 AK120390.1 - ABC transporter 2e-2 At1g51500 CER5 (ECERIFERUM 5) C.G. S.X.
0.03 7e-7 57 Os09g0125900 AK065634.1 - ATP-binding cassette, sub-family G, member 1(White protein homolog) (ATP-binding cassette transporter8). Splice isoform 3 6e-2 At1g51500 CER5 (ECERIFERUM 5) C.G. S.X.
0.02 8e-10 67 Os07g0191600 AK102563.1 - Conserved hypothetical protein 2e+0 At1g69890 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 2e-12 75 Arabidopsis thaliana At1g17840 838363 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. - - - C.G. S.X.
0.16 2e-18 95 Glycine max Gma.11993.1.S1_at BU551348 - - 4e-29 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) C.G. S.X.
0.67 0 1741 Hordeum vulgare Contig6704_at Contig6704 - - 2e-26 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) C.G. S.X.
0.17 6e-25 117 Populus trichocarpa Ptp.956.1.A1_at CV238436 - - 9e-49 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) C.G. S.X.
0.60 0 1080 Triticum aestivum Ta.8225.1.S1_at CK208464 - - 2e-29 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) C.G. S.X.
0.10 7e-43 174 Vitis vinifera 1612744_at CF214403 hypothetical protein LOC100263167 - 7e-43 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) C.G. S.X.
0.37 2e-152 539 Zea mays Zm.8050.1.A1_at CF244335 ABC transporter C05D10.3 in chromosome III - 2e-19 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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