Gene omics information

Query gene ID Os04g0509500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9Os04g0509500AK107601.1-Conserved hypothetical protein3e-19At1g64780ATAMT1S.X.H.G.
0.3846.9Os09g05617009637.m03312--3e-2At3g18570glycine-rich protein / oleosinS.X.H.G.
0.3236.3Os03g0196100AK107004.1-Hypothetical protein2e+0At2g41230unknown proteinS.X.H.G.
0.3134.5Os01g01959009629.m00944--6e-1At2g35640hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.3032.7Os07g0690500AK108634.1-Hypothetical protein3e+0At5g37240unknown proteinS.X.H.G.
0.3032.7Os01g0316400NM_183738.1--7e+0At3g07220transcriptional activator, putativeS.X.H.G.
0.3032.7Os06g04763009634.m02692--5e-1Atcg01120-S.X.H.G.
0.2931.1Os04g0524800AK064753.1-Hypothetical protein1e-3At3g55730MYB109 (myb domain protein 109)S.X.H.G.
0.2422.4Os07g04204009635.m02274--1e-2At1g68945unknown proteinS.X.H.G.
0.2321.2Os12g02706259640.m01678--5e-1At2g41430ERD15 (EARLY RESPONSIVE TO DEHYDRATION 15)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
42.799.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
34.699.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.199.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.599.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.699.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.299.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.799.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.599.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.699.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.499.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7402734Os04g0509600AF001505.1--1e-12At1g64780ATAMT1C.G.S.X.
0.6501298Os02g0620600AK107204.1-Rh-like protein/ammonium transporter familyprotein2e-17At4g13510AMT1C.G.S.X.
0.480837Os02g06205009630.m03934-High affinity ammonium transporter3e-19At1g64780ATAMT1C.G.S.X.
0.065e-1067Os04g03504339632.m02668--1e+1At2g04690cellular repressor of E1A-stimulated genes (CREG) familyC.G.S.X.
0.022e-346Os01g0610750NM_192741.1--3e-1At2g41780unknown proteinC.G.S.X.
0.027e-344Os05g0362100AK100115.1-3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8)9e-8At3g06860MFP2 (MULTIFUNCTIONAL PROTEIN 2)C.G.S.X.
0.027e-344Os05g0400700AK072739.1-DNA-directed RNA polymerase II 19 kDa polypeptide(EC 2.7.7.6) (RNA polymerase II subunit 5)2e-21At5g59180NRPB7C.G.S.X.
0.012e-346Os05g0113300AK106443.1-Conserved hypothetical protein4e-4At3g53720ATCHX20 (CATION/H+ EXCHANGER 20)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.103e-1997Arabidopsis thalianaAt1g64780842786ATAMT1encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root.---C.G.S.X.
0.032e-552Glycine maxGma.9265.1.S1_atBU551320--6e-6At4g28700AMT1C.G.S.X.
0.332e-172605Hordeum vulgareContig11711_atContig11711--1e-4At4g13510AMT1C.G.S.X.
0.072e-1481Populus trichocarpaPtpAffx.208227.1.S1_atpmrna16371ammonium transporter-2e-20At1g64780ATAMT1C.G.S.X.
0.6401503Triticum aestivumTa.27312.1.S1_x_atBT009318.1Ammonium transporter-8e-17At4g13510AMT1C.G.S.X.
0.085e-961Vitis vinifera1610744_atCF415597hypothetical protein LOC100258016-1e+0At2g47170ARF1A1CC.G.S.X.
0.261e-121436Zea maysZm.11141.1.A1_atBM338572--1e-7At1g64780ATAMT1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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