Gene omics information

Query gene ID Os04g0502300
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5371.3Os04g0502300AK120520.1-40S ribosomal protein S116e-59At3g48930EMB1080 (embryo defective 1080)S.X.H.G.
0.4458.1Os02g0189100AK111066.1-Conserved hypothetical protein1e-1At5g44450methyltransferaseS.X.H.G.
0.3236.3Os05g0297900AK071238.1-Signal peptidase 18 subunit (Fragment)3e-2At3g15710signal peptidase, putativeS.X.H.G.
0.2117.9Os08g0524000AK067169.1-Signal recognition particle receptor betasubunit-like protein2e-4At2g18770signal recognition particle bindingS.X.H.G.
0.2117.9Os03g0115200C98021-YOR3513c protein (Fragment)1e-4At3g13230RNA bindingS.X.H.G.
0.1510.3Os07g0673100AK103678.1-Ribosomal protein S8E family protein9e-34At5g06360ribosomal protein S8e family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.898.5GSM302917endo6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
9.197.9GSM240997gif1 7 DAF, biological replicate 1GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
8.997.8GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
8.597.7GSM240995Zhonghua11 7 DAF, biological replicate 2GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
8.397.7GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
8.197.7GSM240998gif1 7 DAF, biological replicate 2GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
7.497.5GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
7.297.4GSM240999gif1 7 DAF, biological replicate 3GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
6.497.2GSM240994Zhonghua11 7 DAF, biological replicate 1GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
6.297.1GSM240996Zhonghua11 7 DAF, biological replicate 3GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.395e-73276Os08g0207000AK058705.1-40S ribosomal protein S11 (S18) (YS12) (RP41)4e-60At3g48930EMB1080 (embryo defective 1080)C.G.S.X.
0.024e-654Os09g0269500AK063538.1-Conserved hypothetical protein1e-2At2g29180unknown proteinC.G.S.X.
0.024e-654Os11g0707000CB673145-Ribulose-bisphosphate carboxylase activase (EC6.3.4.-) (Fragments)2e-125At2g39730RCA (RUBISCO ACTIVASE)C.G.S.X.
0.014e-654Os01g0550300AK106151.1-Conserved hypothetical protein2e-22At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.014e-654Os05g0155500AK100133.1-Importin alpha 2 subunit (NLS receptor)2e-22At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.456e-59228Arabidopsis thalianaAt3g48930824054EMB1080 (embryo defective 1080)F:structural constituent of ribosome;P:embryonic development ending in seed dormancy, translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, membrane;MOBAFP---C.G.S.X.
0.394e-82305Glycine maxGmaAffx.92522.1.S1_atCF808247Ribosomal protein S11 mRNA, 3' end-1e-24At5g23740RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA)C.G.S.X.
0.452e-118424Hordeum vulgareContig14638_atContig14638--4e-35At4g3080040S ribosomal protein S11 (RPS11B)C.G.S.X.
0.411e-57224Populus trichocarpaPtp.5621.1.S1_s_atCV231534hypothetical protein-2e-89At3g48930EMB1080 (embryo defective 1080)C.G.S.X.
0.462e-98359Triticum aestivumTa.9059.1.S1_a_atBJ231303--9e-18At3g48930EMB1080 (embryo defective 1080)C.G.S.X.
0.443e-42171Vitis vinifera1609509_atCF206236.1--1e-50At3g48930EMB1080 (embryo defective 1080)C.G.S.X.
0.412e-96351Zea maysZm.2157.7.S1_atCF019402ribosomal protein S11-1e-38At4g3080040S ribosomal protein S11 (RPS11B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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