Gene omics information

Query gene ID Os04g0474800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9399.2Os04g0474800AK100820.1-Glycoside hydrolase, family 1 protein3e-3At5g42260BGLU12 (BETA GLUCOSIDASE 12)S.X.H.G.
0.2931.1Os05g0159200AK067837.1-Lipolytic enzyme, G-D-S-L family protein2e-4At2g27360lipase, putativeS.X.H.G.
0.2219.4Os02g0695800AK071310.1-Oligopeptide transporter OPT superfamily protein4e-6At5g64410OPT4 (OLIGOPEPTIDE TRANSPORTER 4)S.X.H.G.
0.2219.4Os03g0215000AK100038.1-Conserved hypothetical protein6e-14At1g76340integral membrane family proteinS.X.H.G.
0.2016.5Os06g0470000CB674913-Protein of unknown function DUF563 family protein2e+0At3g54900CXIP1 (CAX INTERACTING PROTEIN 1)S.X.H.G.
0.1611.3Os03g0720300AK120961.1-Glutamate decarboxylase isozyme 1 (EC 4.1.1.15)7e-76At5g17330GADS.X.H.G.
0.127.2Os03g0724100AK068261.1-Cellular retinaldehyde-binding)/triple function,C-terminal domain containing protein1e-2At1g75170SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinS.X.H.G.
0.116.5Os11g0591100AK102348.1-NAD-dependent epimerase/dehydratase family protein1e-138At5g28840GME (GDP-D-MANNOSE 3',5'-EPIMERASE)S.X.H.G.
0.094.9Os03g0749300AK065044.1-Exoglucanase precursor3e-8At5g20950glycosyl hydrolase family 3 proteinS.X.H.G.
0.094.9Os05g0567700AK065497.1-Integral membrane protein2e-5At1g75220integral membrane protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.799.6GSM159172Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
22.199.3GSM159173Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
10.098.0GSM116402Seedling_BAP treated_rep2GSE5167Rice seedling hormone treatment
9.597.9GSM159179Root, 7-day-old Seedling, biological rep 3GSE6893Expression data for reproductive development in rice
8.697.8GSM116401Seedling_BAP treated_rep1GSE5167Rice seedling hormone treatment
7.797.6GSM431937Shoot- +Fe-P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
6.897.3GSM149409Rice Azucena 0ppm Arsenate (Control) Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
6.797.3GSM173091Rice OsSRT1 RNAi transgenic line LM1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
6.697.3GSM431938Shoot- +Fe-P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
6.297.1GSM173093Rice OsSRT1 RNAi transgenic line LM2GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.665e-161569Os04g0474500AK073031.1-Amygdalin hydrolase isoform AH I precursor (EC3.2.1.117)7e-2At1g26560BGLU40 (BETA GLUCOSIDASE 40)C.G.S.X.
0.552e-105385Os04g04746009632.m03783-Beta-primeverosidase (EC 3.2.1.149)5e-5At5g42260BGLU12 (BETA GLUCOSIDASE 12)C.G.S.X.
0.423e-110400Os04g0474300AK066908.1-Conserved hypothetical protein1e-1At5g54570BGLU41 (BETA GLUCOSIDASE 41)C.G.S.X.
0.103e-1377Os04g04747009632.m03784-Hypothetical protein2e+0At4g18692unknown proteinC.G.S.X.
0.101e-1069Os06g03202009634.m02112-Beta-primeverosidase (EC 3.2.1.149)2e-4At3g09260PYK10C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-344Arabidopsis thalianaAt1g26560839196BGLU40 (BETA GLUCOSIDASE 40)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:apoplast, chloroplast;BOPMFA---C.G.S.X.
0.102e-757Glycine maxGmaAffx.92564.1.S1_atCF808289--4e-5At2g44450BGLU15 (BETA GLUCOSIDASE 15)C.G.S.X.
0.042e-550Hordeum vulgareContig2350_atContig2350--8e-1At1g26560BGLU40 (BETA GLUCOSIDASE 40)C.G.S.X.
0.077e-446Populus trichocarpaPtpAffx.139109.1.S1_s_atCX168297hypothetical protein-5e-3At3g03640BGLU25 (BETA GLUCOSIDASE 25)C.G.S.X.
0.152e-43176Triticum aestivumTaAffx.4445.1.S1_atCA741494--1e-3At1g26560BGLU40 (BETA GLUCOSIDASE 40)C.G.S.X.
0.062e-446Vitis vinifera1620808_atAY039034.1beta-glucosidase-4e-10At1g26560BGLU40 (BETA GLUCOSIDASE 40)C.G.S.X.
0.029e-134Zea maysZm.2008.1.A1_atCF623731hypothetical protein LOC100279662-8e-8At3g02990ATHSFA1EC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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