CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0464300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os04g0464300 AK111143.1 - Conserved hypothetical protein 3e-2 At5g36710 unknown protein S.X. H.G.
0.71 89.6 Os03g0597400 AK108626.1 - Conserved hypothetical protein 5e-2 At3g04640 glycine-rich protein S.X. H.G.
0.60 79.7 Os08g0404800 9636.m03123 - - 3e+0 At4g24026 unknown protein S.X. H.G.
0.58 77.0 Os07g0510300 9635.m03206 - Conserved hypothetical protein 2e+0 At5g57270 unknown protein S.X. H.G.
0.54 71.9 Os05g0454400 AK107942.1 - Conserved hypothetical protein 2e-1 At1g78410 VQ motif-containing protein S.X. H.G.
0.52 69.6 Os04g0467300 9632.m03715 - - 2e-1 At2g22000 PROPEP6 (Elicitor peptide 6 precursor) S.X. H.G.
0.42 53.9 Os06g0233100 9634.m01249 - - 3e+0 At5g65000 nucleotide-sugar transporter family protein S.X. H.G.
0.37 45.0 Os10g0208400 NM_195493.1 - - 6e+0 At5g16710 DHAR3 (dehydroascorbate reductase 1) S.X. H.G.
0.26 25.6 Os10g0345500 NM_195897.1 - - 1e+0 At5g14740 CA2 (CARBONIC ANHYDRASE 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.9 99.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.3 99.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.0 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.2 99.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.1 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.9 99.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.4 99.5 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
26.1 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.8 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.0 99.4 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 9e-103 375 Os02g0580900 AK072036.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 7e-1 At5g38610 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.11 2e-17 91 Os10g0554200 AK105765.1 - Nitrate transporter 2e-2 At4g17500 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1) C.G. S.X.
0.06 8e-14 79 Os08g0155400 AK070077.1 - Nitrate transporter (Fragment) 3e-4 At1g12110 NRT1.1 C.G. S.X.
0.06 5e-9 63 Os01g0556700 BM038703 - Dicarboxylate transporter 7e-11 At2g26690 nitrate transporter (NTP2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-2 40 Arabidopsis thaliana At5g36710 833636 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.04 2e-1 38 Glycine max GmaAffx.78088.1.A1_at AI496420 - - 2e-18 At3g20260 structural constituent of ribosome C.G. S.X.
0.10 1e-9 63 Hordeum vulgare Contig7710_at Contig7710 - - 3e-2 At2g39430 disease resistance-responsive protein-related / dirigent protein-related C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.219249.1.S1_s_at pmrna35108 hypothetical protein - 2e+0 At5g36240 zinc knuckle (CCHC-type) family protein C.G. S.X.
0.14 4e-5 50 Triticum aestivum TaAffx.120389.1.S1_s_at BJ226277 - - 1e+0 At2g38390 peroxidase, putative C.G. S.X.
0.05 1e-5 50 Vitis vinifera 1615319_s_at CF207944 hypothetical protein LOC100255020 - 8e-13 At3g21670 nitrate transporter (NTP3) C.G. S.X.
0.11 7e-14 77 Zea mays Zm.1482.2.A1_at CO531725 hypothetical protein LOC100279242 - 7e+0 At5g17280 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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