CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0451200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os04g0451200 AK068176.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-1 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) S.X. H.G.
0.50 68.0 Os01g0681700 CF324859 - Conserved hypothetical protein 2e+0 At5g41401 unknown protein S.X. H.G.
0.44 58.1 Os07g0686300 AK062636.1 - Zn-finger, RING domain containing protein 4e-1 At4g00810 60S acidic ribosomal protein P1 (RPP1B) S.X. H.G.
0.40 51.1 Os07g0143200 AK060245.1 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 2e-1 At3g59060 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6) S.X. H.G.
0.36 44.0 Os09g0487900 AK120902.1 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 2e-11 At2g42280 basic helix-loop-helix (bHLH) family protein S.X. H.G.
0.31 34.5 Os04g0587400 AK071680.1 - Protein of unknown function DUF250 domaincontaining protein 7e-1 At5g43720 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
35.9 99.8 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
33.8 99.8 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
29.7 99.7 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
22.4 99.3 GSM154949 Leaf_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
21.0 99.2 GSM154950 Leaf_tZ-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
18.1 98.9 GSM154948 Leaf_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
16.2 98.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
9.7 98.0 GSM304653 Mutant stable line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
9.6 97.9 GSM278853 KT95-418-non-infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
8.8 97.8 GSM304669 Control for the stable mutant rice line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.51 3e-76 287 Os02g0578300 AK105275.1 - - 2e-7 At1g22400 UGT85A1 C.G. S.X.
0.32 1e-41 173 Os02g0755900 AK104985.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 8e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) C.G. S.X.
0.25 6e-99 363 Os02g0578000 AK064085.1 - Conserved hypothetical protein 1e-11 At1g78270 AtUGT85A4 (UDP-glucosyl transferase 85A4) C.G. S.X.
0.11 7e-46 186 Os04g0324000 AK106366.1 - - 3e-12 At1g78270 AtUGT85A4 (UDP-glucosyl transferase 85A4) C.G. S.X.
0.10 2e-30 135 Os04g0324500 9632.m02422 - - 3e-2 At1g22400 UGT85A1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-1 38 Arabidopsis thaliana At1g22360 838843 AtUGT85A2 (UDP-glucosyl transferase 85A2) F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBOF - - - C.G. S.X.
0.03 1e-6 56 Glycine max GmaAffx.59500.3.S1_at BG790368 - - 2e+0 At5g57181 unknown protein C.G. S.X.
0.29 3e-36 153 Hordeum vulgare Contig11709_at Contig11709 - - 3e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.69508.1.A1_at CV254774 - - 3e+0 At1g60450 AtGolS7 (Arabidopsis thaliana galactinol synthase 7) C.G. S.X.
0.22 6e-45 182 Triticum aestivum Ta.8495.1.A1_at BJ250503 - - 8e-4 At5g66350 SHI (SHORT INTERNODES) C.G. S.X.
0.02 4e+0 32 Vitis vinifera 1618386_at BQ800555 - - 4e-1 At1g63105 unknown protein C.G. S.X.
0.21 2e-33 143 Zea mays Zm.6272.1.A1_at AY111701.1 - - 4e-2 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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