CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0445100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os04g0445100 AK063700.1 - 22.7 kDa class IV heat shock protein precursor 2e+0 At1g54200 unknown protein S.X. H.G.
0.77 93.1 Os03g0245800 AB020973.1 - - 5e-1 At5g42965 nucleic acid binding / ribonuclease H S.X. H.G.
0.71 89.6 Os02g0259900 AK063689.1 - Conserved hypothetical protein 2e-1 At5g64341 CPuORF40 (Conserved peptide upstream open reading frame 40) S.X. H.G.
0.71 89.6 Os01g0136200 AK121025.1 - 17.7 kDa heat shock protein 1e-4 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) S.X. H.G.
0.67 87.2 Os03g0277300 9631.m01656 - Heat shock protein 70 7e-98 At5g02500 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) S.X. H.G.
0.63 82.7 Os03g0266900 D12635.1 - Low molecular mass heat shock protein Oshsp17.3 7e-12 At1g53540 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
55.9 99.9 GSM159207 Seed (S1, 0 - 2 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
50.1 99.9 GSM159208 Seed (S1, 0 - 2 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
44.8 99.9 GSM159209 Seed (S1, 0 - 2 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
43.5 99.9 GSM159213 Seed (S3, 5 - 10 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
42.5 99.9 GSM159214 Seed (S3, 5 - 10 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
39.1 99.9 GSM159215 Seed (S3, 5 - 10 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
30.3 99.7 GSM159217 Seed (S4, 11 - 20 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
14.9 98.6 GSM159218 Seed (S4, 11 - 20 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
10.8 98.1 GSM159219 Seed (S5, 21 - 29 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
10.1 98.0 GSM159211 Seed (S2, 3 - 4 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-7 57 Os03g0327700 AK120305.1 - Hypothetical protein 4e-1 At3g58710 WRKY69 C.G. S.X.
0.03 1e-3 46 Os06g0253100 AK105317.1 - Heat shock protein Hsp20 domain containing protein 9e-2 At1g12665 - C.G. S.X.
0.03 1e-2 42 Os01g0247900 AK109164.1 - AWPM-19-like family protein 1e-1 At1g29520 AWPM-19-like membrane family protein C.G. S.X.
0.03 1e-2 42 Os07g0476900 AK066045.1 - Thioredoxin-related domain containing protein 1e-1 At1g76080 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) C.G. S.X.
0.02 6e-5 50 Os04g0479300 AK106088.1 - Conserved hypothetical protein 2e+0 At4g11870 unknown protein C.G. S.X.
0.02 1e-2 42 Os01g0178500 NM_189526.1 - AUX/IAA protein family protein 6e+0 At5g06510 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At1g54200 841860 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB - - - C.G. S.X.
0.03 2e-1 38 Glycine max HgAffx.18624.1.S1_at CA940556 - - 4e+0 At5g55850 NOI C.G. S.X.
0.11 1e-6 54 Hordeum vulgare Contig3288_x_at Contig3288 - - 5e+0 At3g51325 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 6e-1 36 Populus trichocarpa PtpAffx.2601.1.S1_at DN491679 hypothetical protein - 4e-1 At4g27750 ISI1 (IMPAIRED SUCROSE INDUCTION 1) C.G. S.X.
0.34 4e-54 212 Triticum aestivum Ta.8665.1.S1_at CD914539 - - 8e+0 At1g24010 - C.G. S.X.
0.04 1e-1 36 Vitis vinifera 1610032_at CF405330 hypothetical protein LOC100266315 - 1e-4 At5g12020 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) C.G. S.X.
0.09 6e-11 67 Zea mays Zm.16504.2.A1_at CD438012 heat shock protein18c - 6e+0 At1g19910 AVA-P2 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
L GO:0006811 The directed movement of charged atoms or small charged molecules into, out of, within or between cells.
L GO:0006813 The directed movement of potassium ions (K+) into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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