Gene omics information

Query gene ID Os04g0434400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.2Os04g0434400AK063725.1-Hypothetical protein7e-1At5g42635glycine-rich proteinS.X.H.G.
0.8395.8Os01g0743500AY444338.1-NADP-dependent malic enzyme (EC 1.1.1.40)(NADP-ME)3e-47At5g11670ATNADP-ME2 (NADP-malic enzyme 2)S.X.H.G.
0.7793.1Os09g0127700AK107885.1-Conserved hypothetical protein1e+0At4g11660AT-HSFB2BS.X.H.G.
0.7793.1Os01g0728700AK108000.1-Conserved hypothetical protein3e-2At1g29680unknown proteinS.X.H.G.
0.7391.1Os03g0842900AK107425.1-Short-chain dehydrogenase/reductase SDR familyprotein3e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.7189.6Os09g0433900AK107237.1-Alanine aminotransferase4e-3At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
152.9100.0GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigma
62.599.9GSM159220Seed (S5, 21 - 29 dap), biological rep 2GSE6893Expression data for reproductive development in rice
35.199.8GSM159219Seed (S5, 21 - 29 dap), biological rep 1GSE6893Expression data for reproductive development in rice
32.399.8GSM159218Seed (S4, 11 - 20 dap), biological rep 3GSE6893Expression data for reproductive development in rice
31.299.7GSM159216Seed (S4, 11 - 20 dap), biological rep 1GSE6893Expression data for reproductive development in rice
26.099.5GSM159221Seed (S5, 21 - 29 dap), biological rep 3GSE6893Expression data for reproductive development in rice
25.599.5GSM159217Seed (S4, 11 - 20 dap), biological rep 2GSE6893Expression data for reproductive development in rice
13.498.5GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
10.498.1GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
4.296.0GSM159213Seed (S3, 5 - 10 dap), biological rep 1GSE6893Expression data for reproductive development in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-242Os05g02552009633.m01478--7e+0At4g09260unknown proteinC.G.S.X.
0.029e-240Os01g0592600NM_192593.1--5e-1At2g18410unknown proteinC.G.S.X.
0.012e-242Os01g0195200AK105501.1-Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1)3e-10At2g20300ALE2 (Abnormal Leaf Shape 2)C.G.S.X.
0.012e-242Os09g0103100CR283151-AB-hydrolase associated lipase region domaincontaining protein2e-1At2g15230ATLIP1 (Arabidopsis thaliana lipase 1)C.G.S.X.
0.019e-240Os10g0420200AK110922.1-IQ calmodulin-binding region domain containingprotein5e-5At4g11430hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.011e-140Os09g05479009637.m03189-TPR-like domain containing protein2e+0At1g28270RALFL4 (ralf-like 4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-136Arabidopsis thalianaAt5g42635834271glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMB---C.G.S.X.
0.032e-138Glycine maxGma.133.1.S1_atAF117723.1seed maturation protein PM27-2e-1At1g22600-C.G.S.X.
0.281e-77289Hordeum vulgareContig12232_atContig12232--8e-3At1g22600-C.G.S.X.
0.022e-138Populus trichocarpaPtp.3773.1.S1_atDN488787hypothetical protein-1e-3At4g30662unknown proteinC.G.S.X.
0.388e-81301Triticum aestivumTaAffx.116604.1.S1_atCD490483--1e+0At1g72100late embryogenesis abundant domain-containing protein / LEA domain-containing proteinC.G.S.X.
0.028e-134Vitis vinifera1622873_atCA818444hypothetical LOC100251339-2e-11At1g12760protein binding / ubiquitin-protein ligase/ zinc ion bindingC.G.S.X.
0.022e-240Zea maysZm.17828.1.A1_atBI542933hypothetical protein LOC100278045-6e+0At4g15830bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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