Gene omics information

Query gene ID Os04g0401800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4660.9Os04g0401800AK103868.1-DNA repair metallo-beta-lactamase domaincontaining protein2e-1At5g65180-S.X.H.G.
0.4660.9Os08g03697009636.m02793-HesB/YadR/YfhF family protein7e-5At5g03905hesB-like domain-containing proteinS.X.H.G.
0.127.2Os01g0144600AK061501.1-Hypothetical protein5e-1At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)S.X.H.G.
0.094.9Os07g0673700AK071934.1-Cyclin-like F-box domain containing protein4e+0At3g43583unknown proteinS.X.H.G.
0.084.2Os10g0412000AK066864.1-Phospholipid-translocating P-type ATPase, flippasefamily protein8e-45At1g59820ALA3 (Aminophospholipid ATPase3)S.X.H.G.
0.084.2Os07g0657500AK058476.1--3e-2At5g64905PROPEP3 (Elicitor peptide 3 precursor)S.X.H.G.
0.042.0Os01g0859600AK072151.1-Cyclin-like F-box domain containing protein2e-5At1g67190F-box family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.598.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
15.298.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
4.296.0GSM255762wt collar chipGSE12097antiOsLIC collar chip
3.995.8GSM195224Suspension cellGSE7951Genome-wide gene expression profiling of rice stigma
3.895.7GSM302919leaf_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
3.395.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.094.6GSM255763antiOsLIC collar chipGSE12097antiOsLIC collar chip
2.994.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
2.894.3GSM302922seedling_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
2.794.1GSM302921root_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.018e-654Os11g0176200AK121851.1-HUA enhancer 24e-35At2g06990HEN2 (hua enhancer 2)C.G.S.X.
0.012e-346Os12g0605100AY224547.1-Hypothetical protein3e+0At4g25130peptide methionine sulfoxide reductase, putativeC.G.S.X.
0.018e-344Os03g0719500AK106321.1-Ser-Thr protein kinase-like protein8e-99At1g73450protein kinase, putativeC.G.S.X.
0.018e-344Os09g0327100AK071461.1--2e-31At5g60860AtRABA1f (Arabidopsis Rab GTPase homolog A1f)C.G.S.X.
0.013e-242Os03g04022339631.m02813--1e-1At1g54215proline-rich family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-138Arabidopsis thalianaAt5g65180836642-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFBPAV---C.G.S.X.
0.023e-138Glycine maxGmaAffx.8115.1.A1_atBE659574--2e+0At3g25120mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinC.G.S.X.
0.031e-138Hordeum vulgareContig11737_atContig11737--9e+0At5g46930invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.049e-550Populus trichocarpaPtpAffx.211810.1.S1_atpmrna23163hypothetical protein-1e-20At3g26680SNM1 (SENSITIVE TO NITROGEN MUSTARD 1)C.G.S.X.
0.021e+036Triticum aestivumTaAffx.8456.1.S1_atCA625136--8e-4At4g22460protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.021e+034Vitis vinifera1616431_atCF605090--7e-2At3g57500unknown proteinC.G.S.X.
0.471e-176619Zea maysZm.2952.1.A1_a_atCF629660hypothetical protein LOC100192920-2e-3At3g26680SNM1 (SENSITIVE TO NITROGEN MUSTARD 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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