Gene omics information

Query gene ID Os04g0390700
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.7Os04g0390700AK107261.1-Short-chain dehydrogenase/reductase SDR familyprotein1e-2At5g50700short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.8896.8Os01g0728700AK108000.1-Conserved hypothetical protein3e-2At1g29680unknown proteinS.X.H.G.
0.8094.6Os02g0530600AK102681.1-Poly(ADP-ribose) polymerase, catalytic regiondomain containing protein4e-1At4g32110transferase, transferring glycosyl groupsS.X.H.G.
0.8094.6Os01g0743500AY444338.1-NADP-dependent malic enzyme (EC 1.1.1.40)(NADP-ME)3e-47At5g11670ATNADP-ME2 (NADP-malic enzyme 2)S.X.H.G.
0.7189.6Os04g0434400AK063725.1-Hypothetical protein7e-1At5g42635glycine-rich proteinS.X.H.G.
0.6787.2Os09g0127700AK107885.1-Conserved hypothetical protein1e+0At4g11660AT-HSFB2BS.X.H.G.
0.6382.7Os03g0842900AK107425.1-Short-chain dehydrogenase/reductase SDR familyprotein3e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.6382.7Os09g0433900AK107237.1-Alanine aminotransferase4e-3At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
145.0100.0GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigma
38.899.8GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
34.099.8GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
25.799.5GSM159220Seed (S5, 21 - 29 dap), biological rep 2GSE6893Expression data for reproductive development in rice
21.999.3GSM159218Seed (S4, 11 - 20 dap), biological rep 3GSE6893Expression data for reproductive development in rice
15.698.7GSM159216Seed (S4, 11 - 20 dap), biological rep 1GSE6893Expression data for reproductive development in rice
14.998.6GSM159221Seed (S5, 21 - 29 dap), biological rep 3GSE6893Expression data for reproductive development in rice
14.398.6GSM159217Seed (S4, 11 - 20 dap), biological rep 2GSE6893Expression data for reproductive development in rice
12.898.4GSM159219Seed (S5, 21 - 29 dap), biological rep 1GSE6893Expression data for reproductive development in rice
11.498.2GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.187e-27123Os04g0390800AK108276.1-Short-chain dehydrogenase/reductase SDR familyprotein5e-8At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.062e-861Os03g0842900AK107425.1-Short-chain dehydrogenase/reductase SDR familyprotein3e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.051e-656Os12g0464400AK121922.1-Short-chain dehydrogenase/reductase SDR familyprotein4e-2At5g50700short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.045e-344Os02g0511400AK119471.1-Short-chain dehydrogenase/reductase SDR familyprotein2e-1At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.031e-656Os11g0499600AK106189.1-Short-chain dehydrogenase/reductase SDR familyprotein1e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.012e-242Os01g0113900AK068796.1-Conserved hypothetical protein7e-2At5g38280PR5KC.G.S.X.
0.012e-242Os01g0115700CB621884-Protein kinase family protein3e-1At4g21230protein kinase family proteinC.G.S.X.
0.012e-242Os08g0442700AK111772.1-Receptor-like kinase4e-10At4g30520leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-242Arabidopsis thalianaAt5g50700835141short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAV---C.G.S.X.
0.036e-240Glycine maxGmaAffx.93410.1.S1_s_atCF809135--3e-1At5g16450dimethylmenaquinone methyltransferase family proteinC.G.S.X.
0.078e-548Hordeum vulgareContig11887_atContig11887--2e-6At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.021e-242Populus trichocarpaPtpAffx.155.2.S1_a_atDN501660hypothetical protein-2e-3At5g50700short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.082e-757Triticum aestivumTa.5721.1.S1_atCD911583--3e-3At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)C.G.S.X.
0.023e+032Vitis vinifera1613095_atBQ796088hypothetical protein LOC100250274-5e-6At3g04880DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2)C.G.S.X.
0.037e-548Zea maysZm.9555.1.A1_atBM347835--1e-2At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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