CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0366500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os04g0366500 9632.m02816 - - 1e+1 At3g51060 STY1 (STYLISH 1) S.X. H.G.
0.91 98.9 Os08g0426200 9636.m03305 - - 2e+0 At3g17580 unknown protein S.X. H.G.
0.80 94.6 Os01g0528900 9629.m03236 - - 4e+0 At4g31150 endonuclease V family protein S.X. H.G.
0.80 94.6 Os01g0521100 9629.m03165 - Hypothetical protein 3e+0 At4g10420 - S.X. H.G.
0.73 91.1 Os10g0350100 NM_195936.1 - - 4e-1 At3g47710 bHLH family protein S.X. H.G.
0.67 87.2 Os04g0134700 9632.m00384 - - 1e+1 At5g58500 LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
184.9 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
90.0 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
36.4 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
12.5 98.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.8 98.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.5 98.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.7 97.8 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.2 97.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.1 97.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.53 4e-50 198 Os11g0276800 9639.m01622 - - 4e+0 At5g27750 F-box family protein C.G. S.X.
0.17 4e-4 46 Os10g0132200 9638.m00335 - - 1e+0 At1g65845 unknown protein C.G. S.X.
0.16 5e-22 105 Os08g0344900 9636.m02723 - - 4e+0 At4g10160 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+1 30 Arabidopsis thaliana At3g51060 824270 STY1 (STYLISH 1) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. - - - C.G. S.X.
0.02 4e+0 32 Glycine max PsAffx.C164000035_at PsAffx.C164000035 - - 5e-1 At2g40205 60S ribosomal protein L41 (RPL41C) C.G. S.X.
0.04 4e-1 34 Hordeum vulgare rbags21b16_s_at rbags21b16 - - 1e-2 At5g40200 DegP9 (DegP protease 9) C.G. S.X.
0.04 2e+1 30 Populus trichocarpa PtpAffx.218590.1.S1_at pmrna34258 hypothetical protein - 7e-1 At1g47680 unknown protein C.G. S.X.
0.04 3e+0 32 Triticum aestivum TaAffx.52589.1.S1_at CA704929 - - 8e-1 At3g27503 SCRL19 (SCR-Like 19) C.G. S.X.
0.03 9e-1 32 Vitis vinifera 1621957_at CF511100 - - 3e-1 At5g27450 MK (MEVALONATE KINASE) C.G. S.X.
0.04 5e+0 30 Zea mays Zm.8230.1.A1_at CF025942 hypothetical protein LOC100191834 - 3e+0 At5g15790 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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