CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os04g0324000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 78.0 Os04g0324000 AK106366.1 - - 3e-12 At1g78270 AtUGT85A4 (UDP-glucosyl transferase 85A4) S.X. H.G.
0.50 68.0 Os12g0486800 AK120219.1 - Conserved hypothetical protein 1e+0 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) S.X. H.G.
0.43 55.4 Os02g0619100 9630.m03919 - - 6e+0 At2g03230 - S.X. H.G.
0.40 51.1 Os01g0568100 9629.m03675 - - 6e-1 At4g20260 DREPP plasma membrane polypeptide family protein S.X. H.G.
0.36 44.0 Os03g0158000 AK062544.1 - Conserved hypothetical protein 3e-5 At2g42990 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.32 36.3 Os01g0860700 AK062402.1 - Hypothetical protein 3e+0 At3g46560 TIM9 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
35.1 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
33.4 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.5 99.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.9 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.6 99.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.0 99.5 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.8 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.32 1e-31 139 Os02g0578000 AK064085.1 - Conserved hypothetical protein 1e-11 At1g78270 AtUGT85A4 (UDP-glucosyl transferase 85A4) C.G. S.X.
0.15 3e-66 254 Os04g0324500 9632.m02422 - - 3e-2 At1g22400 UGT85A1 C.G. S.X.
0.11 6e-46 186 Os04g0451200 AK068176.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-1 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
0.11 3e-29 131 Os02g0755900 AK104985.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 8e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) C.G. S.X.
0.08 2e-33 145 Os02g0578300 AK105275.1 - - 2e-7 At1g22400 UGT85A1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-12 73 Arabidopsis thaliana At1g78270 844162 AtUGT85A4 (UDP-glucosyl transferase 85A4) F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBFO - - - C.G. S.X.
0.03 3e-1 38 Glycine max GmaAffx.47330.1.S1_at BU926438 - - 2e-1 At4g09840 unknown protein C.G. S.X.
0.15 6e-43 174 Hordeum vulgare Contig9397_at Contig9397 - - 2e-4 At1g22370 AtUGT85A5 (UDP-glucosyl transferase 85A5) C.G. S.X.
0.03 4e+0 34 Populus trichocarpa PtpAffx.220431.1.S1_at pmrna36822 hypothetical protein - 3e+0 At4g24700 unknown protein C.G. S.X.
0.20 2e-41 171 Triticum aestivum TaAffx.119175.1.A1_s_at BJ285398 - - 4e+0 At5g65040 senescence-associated protein-related C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1612277_at CF215260 hypothetical protein LOC100243794 - 1e-1 At4g32750 unknown protein C.G. S.X.
0.12 1e-31 137 Zea mays Zm.6272.1.A1_at AY111701.1 - - 4e-2 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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